Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.276271	Glg1	golgi apparatus protein 1	8	8 53.5 cM (8 53.5 cM)	20340
Gene Ontology	extracellular space | fibroblast growth factor binding | Golgi apparatus | integral to membrane | membrane
Human Homolog	GLG1[golgi apparatus protein 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 135 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CCTTTAATCC (355) 52.2 0.0522 P8 Cb GC CTGTGTAATT (2) 8.2 0.0082 P8 Cb GC CAGACTTGGC (3) 6.5 0.0065 P8 Cb GC TCTGATGGAG (3) 6.5 0.0065 P8 Cb GC TCCTCGGTGT (2) 4.9 0.0049 P8 Cb GC CTGTGCAGGG (2) 3.3 0.0033 P8 Cb GC AACAGTAAAA (4) 1.6 0.0016 P8 Cb GC CAGCAGACTC (3) 1.6 0.0016 P8 Cb GC CTGATGGAAG (2) 1.6 0.0016 P8 Cb GC GCCAAGTCTG 1.6 0.0016 P8 Cb GC GTCAGAATAG 1.6 0.0016 Cb medulloblastoma CCTTTAATCC (355) 41.6 0.0416 Cb medulloblastoma CTGTGTAATT (2) 6.9 0.0069 Cb medulloblastoma CAGACTTGGC (3) 4.6 0.0046 Cb medulloblastoma GTCAGAATAG 2.3 0.0023 Cb medulloblastoma TCCTCGGTGT (2) 2.3 0.0023 P8 GC+1d culture CCTTTAATCC (355) 32 0.032 P8 GC+1d culture CTGTGTAATT (2) 6.8 0.0068 P8 GC+1d culture CTGATGGAAG (2) 4.6 0.0046 P8 GC+1d culture TCCTCGGTGT (2) 4.6 0.0046 P8 GC+1d culture CAGACTTGGC (3) 3.4 0.0034 P8 GC+1d culture CAGCAGACTC (3) 3.4 0.0034 P8 GC+1d culture TCTGTTTCCT (4) 3.4 0.0034 P8 GC+1d culture AGGTGGGGTG (3) 1.1 0.0011 P8 GC+1d culture CCTTTTAATC (5) 1.1 0.0011 P8 GC+1d culture GCCAAGTCTG 1.1 0.0011 P8 GC+1d culture GCTCCAGTGC (4) 1.1 0.0011 P8 GC+1d culture TCTGATGGAG (3) 1.1 0.0011 P8 GC+SHH+1d culture CCTTTAATCC (355) 25.8 0.0258 P8 GC+SHH+1d culture TCTGTTTCCT (4) 5.9 0.0059 P8 GC+SHH+1d culture CTGTGTAATT (2) 4.7 0.0047 P8 GC+SHH+1d culture CAGACTTGGC (3) 3.5 0.0035 P8 GC+SHH+1d culture CAGCAGACTC (3) 2.3 0.0023 P8 GC+SHH+1d culture CTGTGCAGGG (2) 2.3 0.0023 P8 GC+SHH+1d culture AACAGTAAAA (4) 1.2 0.0012 P8 GC+SHH+1d culture CCAGGCAGAC 1.2 0.0012 P8 GC+SHH+1d culture CCTTTTAATC (5) 1.2 0.0012 P8 GC+SHH+1d culture TCCTCGGTGT (2) 1.2 0.0012 P8 GC+SHH+1d culture TCTGATGGAG (3) 1.2 0.0012 3T3 fibroblasts CCTTTAATCC (355) 70.1 0.0701 3T3 fibroblasts GCTCCAGTGC (4) 24.5 0.0245 3T3 fibroblasts TCCTCGGTGT (2) 17.5 0.0175 3T3 fibroblasts CCAGGCAGAC 3.5 0.0035 3T3 fibroblasts CTGTGCAGGG (2) 3.5 0.0035 3T3 fibroblasts TCTGATGGAG (3) 3.5 0.0035 3T3 fibroblasts TCTGTTTCCT (4) 3.5 0.0035 E15 cortex CCTTTAATCC (355) 54.4 0.0544 E15 cortex TCCTCGGTGT (2) 24.7 0.0247 E15 cortex AACGAGAAGT (6) 4.9 0.0049 E15 cortex CTGTGTAATT (2) 4.9 0.0049 E15 cortex GTGGGTGGGG (2) 4.9 0.0049 E15 cortex TCTGTTTCCT (4) 4.9 0.0049 P1 cortex CCTTTAATCC (355) 154.5 0.1545 P1 cortex TCCTCGGTGT (2) 9.1 0.0091 P1 cortex CCTTTTAATC (5) 4.5 0.0045 P1 cortex TCTGATGGAG (3) 4.5 0.0045 P1 cortex TCTGTTTCCT (4) 4.5 0.0045 P1 cortex TTTGGAAAAA (5) 4.5 0.0045 Hypothalamus CCTTTAATCC (355) 19.9 0.0199 Hypothalamus AACGAGAAGT (6) 1.8 0.0018 Hypothalamus CCAGGCAGAC 1.8 0.0018 Hypothalamus CTGTGCAGGG (2) 1.8 0.0018 Hypothalamus CTGTGTAATT (2) 1.8 0.0018 Hypothalamus GTGGGTGGGG (2) 1.8 0.0018 Hypothalamus TCCTCGGTGT (2) 1.8 0.0018 Hypothalamus TCTGTTTCCT (4) 1.8 0.0018 E12.5 retina CCTTTAATCC (355) 75.1 0.0751 E12.5 retina CAGCAGACTC (3) 1.9 0.0019 E12.5 retina CCAGGCAGAC 1.9 0.0019 E12.5 retina CTGTGTAATT (2) 1.9 0.0019 E12.5 retina TCCTCGGTGT (2) 1.9 0.0019 E12.5 retina TCTGTTTCCT (4) 1.9 0.0019 E14.5 retina CCTTTAATCC (355) 120.3 0.1203 E14.5 retina TCTGTTTCCT (4) 5.5 0.0055 E14.5 retina CCTTTTAATC (5) 1.8 0.0018 E14.5 retina CTGTGTAATT (2) 1.8 0.0018 E14.5 retina GTGGGTGGGG (2) 1.8 0.0018 E16.5 retina CCTTTAATCC (355) 68.8 0.0688 E16.5 retina TCTGTTTCCT (4) 10.9 0.0109 E16.5 retina TCCTCGGTGT (2) 5.4 0.0054 E16.5 retina AACGAGAAGT (6) 1.8 0.0018 E16.5 retina AGGTGGGGTG (3) 1.8 0.0018 E16.5 retina CTGTGTAATT (2) 1.8 0.0018 E18.5 retina CCTTTAATCC (355) 23.6 0.0236 E18.5 retina GTTTCCTGCT (2) 3.6 0.0036 E18.5 retina TCTGTTTCCT (4) 3.6 0.0036 E18.5 retina TCCTCGGTGT (2) 1.8 0.0018 E18.5 retina TTTGGAAAAA (5) 1.8 0.0018 P0.5 retina CCTTTAATCC (355) 72.6 0.0726 P0.5 retina TCCTCGGTGT (2) 5.9 0.0059 P0.5 retina TCTGTTTCCT (4) 3.9 0.0039 P0.5 retina CCTTTTAATC (5) 2 0.002 P0.5 retina CTGTGCAGGG (2) 2 0.002 P0.5 retina GTGGGTGGGG (2) 2 0.002 P2.5 retina CCTTTAATCC (355) 70.4 0.0704 P2.5 retina TCCTCGGTGT (2) 7 0.007 P2.5 retina CCTTTTAATC (5) 3.5 0.0035 P2.5 retina CAGCAGACTC (3) 1.8 0.0018 P2.5 retina CTGTGTAATT (2) 1.8 0.0018 P2.5 retina GTCAGAATAG 1.8 0.0018 P4.5 retina CCTTTAATCC (355) 43.6 0.0436 P4.5 retina CCTTTTAATC (5) 4 0.004 P4.5 retina CCAGGCAGAC 2 0.002 P4.5 retina TCCTCGGTGT (2) 2 0.002 P4.5 retina TCTGATGGAG (3) 2 0.002 P4.5 retina TTTGGAAAAA (5) 2 0.002 P6.5 retina CCTTTAATCC (355) 70 0.07 P6.5 retina TCTGATGGAG (3) 5 0.005 P6.5 retina TCCTCGGTGT (2) 3.3 0.0033 P6.5 retina AACAGTAAAA (4) 1.7 0.0017 P6.5 retina CCTTTTAATC (5) 1.7 0.0017 P6.5 retina CTGTGTAATT (2) 1.7 0.0017 P10.5 crx- retina CCTTTAATCC (355) 63.2 0.0632 P10.5 crx- retina CTGTGTAATT (2) 13 0.013 P10.5 crx- retina CTGATGGAAG (2) 3.7 0.0037 P10.5 crx- retina TCCTCGGTGT (2) 3.7 0.0037 P10.5 crx- retina CCTTTTAATC (5) 1.9 0.0019 P10.5 crx- retina GCCAAGTCTG 1.9 0.0019 P10.5 crx- retina GTCAGAATAG 1.9 0.0019 P10.5 crx- retina GTGGGTGGGG (2) 1.9 0.0019 P10.5 crx+ retina CCTTTAATCC (355) 38.4 0.0384 P10.5 crx+ retina CTGTGTAATT (2) 5.8 0.0058 P10.5 crx+ retina CCTTTTAATC (5) 3.8 0.0038 P10.5 crx+ retina TCCTCGGTGT (2) 1.9 0.0019 P10.5 crx+ retina TCTGATGGAG (3) 1.9 0.0019 Adult retinal CCTTTAATCC (355) 129.6 0.1296 Adult retinal CTGTGTAATT (2) 7.4 0.0074 Adult retinal CCTTTTAATC (5) 3.7 0.0037 Adult retinal TCCTCGGTGT (2) 3.7 0.0037 Adult retinal TCTGATGGAG (3) 1.9 0.0019 ONL CCTTTAATCC (355) 84.3 0.0843 ONL CTGTGTAATT (2) 5.7 0.0057 ONL AACAGTAAAA (4) 3.8 0.0038 ONL GTTTCCTGCT (2) 3.8 0.0038 ONL AGGTGGGGTG (3) 1.9 0.0019