Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.276277
AI839550
expressed sequence AI839550
7
233065
Human Homolog
MGC15677[hypothetical protein MGC15677]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 64 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
GAAAAAAAAA (
204
)
45.7
0.0457
P8 Cb GC
GAGAAGACAC
(
6
)
6.5
0.0065
Cb medulloblastoma
GAAAAAAAAA (
204
)
173.4
0.1734
Cb medulloblastoma
GAGAAGACAC
(
6
)
27.7
0.0277
Cb medulloblastoma
GAGAAGAACC (
8
)
2.3
0.0023
Cb medulloblastoma
GCCGAGCTGA (
3
)
2.3
0.0023
P8 GC+1d culture
GAAAAAAAAA (
204
)
41.1
0.0411
P8 GC+1d culture
GAGAAGACAC
(
6
)
10.3
0.0103
P8 GC+1d culture
GAGGAGCAGG (
6
)
1.1
0.0011
P8 GC+1d culture
GCCGAGCTGA (
3
)
1.1
0.0011
P8 GC+SHH+1d culture
GAAAAAAAAA (
204
)
77.3
0.0773
P8 GC+SHH+1d culture
GAGAAGACAC
(
6
)
8.2
0.0082
P8 GC+SHH+1d culture
GAGGAGCAGG (
6
)
3.5
0.0035
P8 GC+SHH+1d culture
GCCGAGCTGA (
3
)
3.5
0.0035
P8 GC+SHH+1d culture
GAGAAGAACC (
8
)
1.2
0.0012
3T3 fibroblasts
GAGAAGACAC
(
6
)
7
0.007
E15 cortex
GAAAAAAAAA (
204
)
54.4
0.0544
E15 cortex
GAGAAGAACC (
8
)
4.9
0.0049
E15 cortex
GAGAAGACAC
(
6
)
4.9
0.0049
P1 cortex
GAAAAAAAAA (
204
)
45.5
0.0455
Hypothalamus
GAAAAAAAAA (
204
)
67
0.067
Hypothalamus
GAGAAGACAC
(
6
)
19.9
0.0199
E12.5 retina
GAAAAAAAAA (
204
)
46.9
0.0469
E12.5 retina
GAGAAGACAC
(
6
)
11.3
0.0113
E12.5 retina
GAGGAGCAGG (
6
)
1.9
0.0019
E14.5 retina
GAAAAAAAAA (
204
)
34.6
0.0346
E14.5 retina
GAGAAGACAC
(
6
)
12.8
0.0128
E14.5 retina
GAGGAGCAGG (
6
)
1.8
0.0018
E14.5 retina
GTTTCCATAG
1.8
0.0018
E16.5 retina
GAAAAAAAAA (
204
)
23.5
0.0235
E16.5 retina
GAGAAGACAC
(
6
)
10.9
0.0109
E16.5 retina
GAGAAGAACC (
8
)
3.6
0.0036
E16.5 retina
GAGGAGCAGG (
6
)
1.8
0.0018
E18.5 retina
GAAAAAAAAA (
204
)
65.5
0.0655
E18.5 retina
GAGAAGACAC
(
6
)
9.1
0.0091
E18.5 retina
GTTTCCATAG
1.8
0.0018
P0.5 retina
GAAAAAAAAA (
204
)
35.3
0.0353
P0.5 retina
GAGAAGACAC
(
6
)
7.9
0.0079
P0.5 retina
GTTTCCATAG
2
0.002
P2.5 retina
GAAAAAAAAA (
204
)
86.2
0.0862
P2.5 retina
GAGAAGACAC
(
6
)
17.6
0.0176
P4.5 retina
GAAAAAAAAA (
204
)
51.5
0.0515
P4.5 retina
GAGAAGACAC
(
6
)
19.8
0.0198
P4.5 retina
GCCGAGCTGA (
3
)
2
0.002
P6.5 retina
GAAAAAAAAA (
204
)
40
0.04
P6.5 retina
GAGAAGACAC
(
6
)
21.7
0.0217
P6.5 retina
GAGGAGCAGG (
6
)
1.7
0.0017
P6.5 retina
GCCGAGCTGA (
3
)
1.7
0.0017
P6.5 retina
GTTTCCATAG
1.7
0.0017
P10.5 crx- retina
GAAAAAAAAA (
204
)
16.7
0.0167
P10.5 crx- retina
GAGAAGACAC
(
6
)
7.4
0.0074
P10.5 crx+ retina
GAAAAAAAAA (
204
)
42.3
0.0423
P10.5 crx+ retina
GAGAAGACAC
(
6
)
5.8
0.0058
P10.5 crx+ retina
GAGAAGAACC (
8
)
3.8
0.0038
P10.5 crx+ retina
GAGGAGCAGG (
6
)
3.8
0.0038
P10.5 crx+ retina
GCCGAGCTGA (
3
)
1.9
0.0019
P10.5 crx+ retina
TTGTGGTGAT (
2
)
1.9
0.0019
Adult retinal
GAGAAGACAC
(
6
)
18.5
0.0185
Adult retinal
GAAAAAAAAA (
204
)
16.7
0.0167
Adult retinal
GAGGAGCAGG (
6
)
1.9
0.0019
Adult retinal
GCCGAGCTGA (
3
)
1.9
0.0019
ONL
GAAAAAAAAA (
204
)
24.9
0.0249
ONL
GAGAAGACAC
(
6
)
7.7
0.0077
ONL
GTTTCCATAG
1.9
0.0019
