Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.276405	6030422H21Rik	RIKEN cDNA 6030422H21 gene	17		402765
Mm.276405	Fkbp5	FK506 binding protein 5	17	17 13.0 cM	14229
Gene Ontology	isomerase activity | nucleus | peptidyl-prolyl cis-trans isomerase activity | protein folding
Human Homolog	FKBP5[FK506 binding protein 5]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 94 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TGATGTTTGA (6) 13.1 0.0131 P8 Cb GC GCAGGGGCGG (4) 4.9 0.0049 P8 Cb GC CAAAATGGTT (3) 3.3 0.0033 P8 Cb GC CCAGGAAACA (3) 1.6 0.0016 Cb medulloblastoma GCAGGGGCGG (4) 11.6 0.0116 Cb medulloblastoma TGATGTTTGA (6) 11.6 0.0116 Cb medulloblastoma TAAAATCAAG (2) 4.6 0.0046 Cb medulloblastoma GAAGAAGGAA (7) 2.3 0.0023 Cb medulloblastoma TCCCACAGGC (8) 2.3 0.0023 Cb medulloblastoma TTAAGAAGTT (2) 2.3 0.0023 P8 GC+1d culture TGATGTTTGA (6) 13.7 0.0137 P8 GC+1d culture GCAGGGGCGG (4) 11.4 0.0114 P8 GC+1d culture TAAAATCAAG (2) 6.8 0.0068 P8 GC+1d culture TTCTTGTATT (3) 3.4 0.0034 P8 GC+1d culture GCCGCCCTGC (4) 2.3 0.0023 P8 GC+1d culture GAAGAAGGAA (7) 1.1 0.0011 P8 GC+1d culture TCCCACAGGC (8) 1.1 0.0011 P8 GC+1d culture TTAAGAAGTT (2) 1.1 0.0011 P8 GC+SHH+1d culture TGATGTTTGA (6) 17.6 0.0176 P8 GC+SHH+1d culture GCAGGGGCGG (4) 4.7 0.0047 P8 GC+SHH+1d culture TTCTTGTATT (3) 2.3 0.0023 P8 GC+SHH+1d culture GAAGAAGGAA (7) 1.2 0.0012 P8 GC+SHH+1d culture GCCGCCCTGC (4) 1.2 0.0012 P8 GC+SHH+1d culture TAAAATCAAG (2) 1.2 0.0012 P8 GC+SHH+1d culture TCCCACAGGC (8) 1.2 0.0012 3T3 fibroblasts GCAGGGGCGG (4) 17.5 0.0175 3T3 fibroblasts GCCGCCCTGC (4) 3.5 0.0035 3T3 fibroblasts TGATGTTTGA (6) 3.5 0.0035 E15 cortex TGATGTTTGA (6) 9.9 0.0099 E15 cortex CCAGGAAACA (3) 4.9 0.0049 E15 cortex GCAGGGGCGG (4) 4.9 0.0049 P1 cortex TGATGTTTGA (6) 9.1 0.0091 P1 cortex GCAGGGGCGG (4) 4.5 0.0045 Hypothalamus TAAAATCAAG (2) 7.2 0.0072 Hypothalamus CAAAAATAGT (4) 3.6 0.0036 Hypothalamus GCAGGGGCGG (4) 3.6 0.0036 Hypothalamus TGATGTTTGA (6) 3.6 0.0036 E12.5 retina GCAGGGGCGG (4) 11.3 0.0113 E12.5 retina TGATGTTTGA (6) 11.3 0.0113 E12.5 retina CAAAAATAGA (2) 3.8 0.0038 E12.5 retina TTCTTGTATT (3) 3.8 0.0038 E12.5 retina GAAGAAGGAA (7) 1.9 0.0019 E12.5 retina TAAAATCAAG (2) 1.9 0.0019 E12.5 retina TCAGGCATTA (4) 1.9 0.0019 E14.5 retina TGATGTTTGA (6) 10.9 0.0109 E14.5 retina TAAAATCAAG (2) 3.6 0.0036 E14.5 retina GCAGGGGCGG (4) 1.8 0.0018 E14.5 retina TCCCACAGGC (8) 1.8 0.0018 E16.5 retina GCAGGGGCGG (4) 9.1 0.0091 E16.5 retina TGATGTTTGA (6) 7.2 0.0072 E16.5 retina TCCCACAGGC (8) 3.6 0.0036 E16.5 retina CAAAAATAGA (2) 1.8 0.0018 E18.5 retina TGATGTTTGA (6) 10.9 0.0109 E18.5 retina TAAAATCAAG (2) 7.3 0.0073 E18.5 retina GCAGGGGCGG (4) 3.6 0.0036 E18.5 retina TTCTTGTATT (3) 3.6 0.0036 E18.5 retina CAAAAATAGA (2) 1.8 0.0018 P0.5 retina TGATGTTTGA (6) 13.7 0.0137 P0.5 retina TCAGGCATTA (4) 5.9 0.0059 P0.5 retina TCCCACAGGC (8) 3.9 0.0039 P0.5 retina TTCTTGTATT (3) 2 0.002 P2.5 retina TGATGTTTGA (6) 19.4 0.0194 P2.5 retina GCAGGGGCGG (4) 10.6 0.0106 P2.5 retina TCAGGCATTA (4) 7 0.007 P2.5 retina TAAAATCAAG (2) 5.3 0.0053 P2.5 retina CCAGGAAACA (3) 1.8 0.0018 P4.5 retina TGATGTTTGA (6) 9.9 0.0099 P4.5 retina TAAAATCAAG (2) 5.9 0.0059 P4.5 retina CAAAAATAGA (2) 2 0.002 P4.5 retina GCAGGGGCGG (4) 2 0.002 P6.5 retina GCAGGGGCGG (4) 16.7 0.0167 P6.5 retina TGATGTTTGA (6) 15 0.015 P6.5 retina GAAGAAGGAA (7) 6.7 0.0067 P6.5 retina TAAAATCAAG (2) 6.7 0.0067 P6.5 retina CAAAATGGTT (3) 1.7 0.0017 P6.5 retina TCAGGCATTA (4) 1.7 0.0017 P10.5 crx- retina TGATGTTTGA (6) 11.1 0.0111 P10.5 crx- retina TAAAATCAAG (2) 7.4 0.0074 P10.5 crx- retina GAAGAAGGAA (7) 3.7 0.0037 P10.5 crx- retina GCAGGGGCGG (4) 1.9 0.0019 P10.5 crx+ retina GCAGGGGCGG (4) 30.8 0.0308 P10.5 crx+ retina TGATGTTTGA (6) 13.5 0.0135 P10.5 crx+ retina TAAAATCAAG (2) 7.7 0.0077 P10.5 crx+ retina GAAGAAGGAA (7) 1.9 0.0019 P10.5 crx+ retina TCAGGCATTA (4) 1.9 0.0019 Adult retinal TGATGTTTGA (6) 11.1 0.0111 Adult retinal GCAGGGGCGG (4) 9.3 0.0093 Adult retinal TCAGGCATTA (4) 7.4 0.0074 Adult retinal TAAAATCAAG (2) 5.6 0.0056 Adult retinal CAAAAATAGT (4) 1.9 0.0019 ONL GCAGGGGCGG (4) 9.6 0.0096 ONL GAAGAAGGAA (7) 5.7 0.0057 ONL TGATGTTTGA (6) 5.7 0.0057 ONL TAAAATCAAG (2) 1.9 0.0019