Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.276503
C77798
expressed sequence C77798
7
97362
Mm.276503
2700023B17Rik
RIKEN cDNA 2700023B17 gene
7
67070
Human Homolog
C19orf13[chromosome 19 open reading frame 13]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 84 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
GAATAAAGAG
(
6
)
17.9
0.0179
P8 Cb GC
TCAGAGGCCT
(
4
)
14.7
0.0147
P8 Cb GC
AATAATTTAT
(
6
)
4.9
0.0049
P8 Cb GC
CATAGTGTAT
(
2
)
1.6
0.0016
Cb medulloblastoma
TCAGAGGCCT
(
4
)
64.7
0.0647
Cb medulloblastoma
AATAATTTAT
(
6
)
2.3
0.0023
Cb medulloblastoma
GAATAAAGAG
(
6
)
2.3
0.0023
P8 GC+1d culture
TCAGAGGCCT
(
4
)
32
0.032
P8 GC+1d culture
GAATAAAGAG
(
6
)
4.6
0.0046
P8 GC+1d culture
AATAATTTAT
(
6
)
2.3
0.0023
P8 GC+1d culture
CATAGTGTAT
(
2
)
1.1
0.0011
P8 GC+1d culture
GTCCTGGAAA
(
8
)
1.1
0.0011
P8 GC+SHH+1d culture
TCAGAGGCCT
(
4
)
29.3
0.0293
P8 GC+SHH+1d culture
GAATAAAGAG
(
6
)
12.9
0.0129
P8 GC+SHH+1d culture
CATAGTGTAT
(
2
)
1.2
0.0012
P8 GC+SHH+1d culture
GAATAAAGAA (
6
)
1.2
0.0012
3T3 fibroblasts
GTCATAGCTG (
590
)
10.5
0.0105
3T3 fibroblasts
AGCGGGGGCA
(
3
)
3.5
0.0035
E15 cortex
TCAGAGGCCT
(
4
)
9.9
0.0099
E15 cortex
GGGGTCATCG (
3
)
4.9
0.0049
E15 cortex
GTCATAGCTG (
590
)
4.9
0.0049
P1 cortex
GAATAAAGAG
(
6
)
9.1
0.0091
P1 cortex
TCAGAGGCCT
(
4
)
9.1
0.0091
Hypothalamus
TCAGAGGCCT
(
4
)
63.4
0.0634
Hypothalamus
GAATAAAGAG
(
6
)
3.6
0.0036
Hypothalamus
AATAATTTAT
(
6
)
1.8
0.0018
E12.5 retina
GAATAAAGAG
(
6
)
24.4
0.0244
E12.5 retina
TCAGAGGCCT
(
4
)
3.8
0.0038
E12.5 retina
CATAGTGTAT
(
2
)
1.9
0.0019
E14.5 retina
GAATAAAGAG
(
6
)
18.2
0.0182
E14.5 retina
AATAATTTAT
(
6
)
5.5
0.0055
E14.5 retina
TCAGAGGCCT
(
4
)
1.8
0.0018
E16.5 retina
GAATAAAGAG
(
6
)
10.9
0.0109
E16.5 retina
TCAGAGGCCT
(
4
)
5.4
0.0054
E16.5 retina
CATAGTGTAT
(
2
)
1.8
0.0018
E16.5 retina
GAATAAAGAA (
6
)
1.8
0.0018
E16.5 retina
GTCCTGGAAA
(
8
)
1.8
0.0018
E18.5 retina
GAATAAAGAG
(
6
)
27.3
0.0273
E18.5 retina
TCAGAGGCCT
(
4
)
9.1
0.0091
E18.5 retina
AATAATTTAT
(
6
)
5.5
0.0055
E18.5 retina
GAATAAAGAA (
6
)
1.8
0.0018
P0.5 retina
GAATAAAGAG
(
6
)
7.9
0.0079
P0.5 retina
TCAGAGGCCT
(
4
)
5.9
0.0059
P0.5 retina
CATAGTGTAT
(
2
)
3.9
0.0039
P0.5 retina
GTCATAGCTG (
590
)
3.9
0.0039
P0.5 retina
AATAATTTAT
(
6
)
2
0.002
P2.5 retina
GAATAAAGAG
(
6
)
21.1
0.0211
P2.5 retina
TCAGAGGCCT
(
4
)
8.8
0.0088
P2.5 retina
AATAATTTAT
(
6
)
1.8
0.0018
P2.5 retina
GTCATAGCTG (
590
)
1.8
0.0018
P4.5 retina
GAATAAAGAG
(
6
)
37.6
0.0376
P4.5 retina
TCAGAGGCCT
(
4
)
7.9
0.0079
P4.5 retina
AATAATTTAT
(
6
)
2
0.002
P4.5 retina
CATAGTGTAT
(
2
)
2
0.002
P4.5 retina
GAATAAAGAA (
6
)
2
0.002
P4.5 retina
GGGGTCATCG (
3
)
2
0.002
P4.5 retina
GTCATAGCTG (
590
)
2
0.002
P6.5 retina
GAATAAAGAG
(
6
)
18.3
0.0183
P6.5 retina
TCAGAGGCCT
(
4
)
10
0.01
P6.5 retina
GAATAAAGAA (
6
)
3.3
0.0033
P6.5 retina
GTCATAGCTG (
590
)
3.3
0.0033
P6.5 retina
AATAATTTAT
(
6
)
1.7
0.0017
P6.5 retina
CATAGTGTAT
(
2
)
1.7
0.0017
P6.5 retina
GGGGTCATCG (
3
)
1.7
0.0017
P10.5 crx- retina
TCAGAGGCCT
(
4
)
9.3
0.0093
P10.5 crx- retina
CATAGTGTAT
(
2
)
5.6
0.0056
P10.5 crx- retina
AATAATTTAT
(
6
)
3.7
0.0037
P10.5 crx- retina
GAATAAAGGG (
5
)
3.7
0.0037
P10.5 crx- retina
GAATAAAGAG
(
6
)
1.9
0.0019
P10.5 crx+ retina
TCAGAGGCCT
(
4
)
50
0.05
P10.5 crx+ retina
GAATAAAGAG
(
6
)
5.8
0.0058
P10.5 crx+ retina
CATAGTGTAT
(
2
)
3.8
0.0038
P10.5 crx+ retina
GAATAAAGGG (
5
)
3.8
0.0038
P10.5 crx+ retina
GGGGTCATCG (
3
)
1.9
0.0019
Adult retinal
TCAGAGGCCT
(
4
)
24.1
0.0241
Adult retinal
GAATAAAGAG
(
6
)
3.7
0.0037
Adult retinal
CATAGTGTAT
(
2
)
1.9
0.0019
Adult retinal
GTCATAGCTG (
590
)
1.9
0.0019
Adult retinal
GTCCTGGAAA
(
8
)
1.9
0.0019
ONL
AGCGGGGGCA
(
3
)
7.7
0.0077
ONL
GTCATAGCTG (
590
)
5.7
0.0057
ONL
CATAGTGTAT
(
2
)
1.9
0.0019
ONL
GAATAAAGAG
(
6
)
1.9
0.0019
ONL
TCAGAGGCCT
(
4
)
1.9
0.0019
