Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.276618	Atp6v1c1	ATPase, H+ transporting, V1 subunit C, isoform 1	15		66335
Gene Ontology	ATP binding | ATP biosynthesis | ATP synthesis coupled proton transport | hydrogen ion transporter activity | hydrogen-exporting ATPase activity, phosphorylative mechanism | hydrolase activity | hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances | proton transport | proton-transporting two-sector ATPase complex
Human Homolog	ATP6V1C1[ATPase, H+ transporting, lysosomal 42kDa, V1 subunit C, isoform 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 62 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TGCCCAAGAA (4) 4.9 0.0049 P8 Cb GC TGTTGGGAAA (2) 1.6 0.0016 Cb medulloblastoma GTGATATTTA 9.2 0.0092 Cb medulloblastoma TGTTGGGAAA (2) 9.2 0.0092 Cb medulloblastoma TGCCCAAGAA (4) 6.9 0.0069 Cb medulloblastoma GTATGCATAA 4.6 0.0046 P8 GC+1d culture TGCCCAAGAA (4) 2.3 0.0023 P8 GC+1d culture TGGTCCATAT (5) 2.3 0.0023 P8 GC+1d culture GATATCCCTG (2) 1.1 0.0011 P8 GC+1d culture GTATGCATAA 1.1 0.0011 P8 GC+1d culture GTGATATTTA 1.1 0.0011 P8 GC+SHH+1d culture TGCCCAAGAA (4) 2.3 0.0023 P8 GC+SHH+1d culture TGGTCCATAT (5) 2.3 0.0023 P8 GC+SHH+1d culture GTGATATTTA 1.2 0.0012 P8 GC+SHH+1d culture TGTTGGGAAA (2) 1.2 0.0012 E15 cortex GTATGCATAA 4.9 0.0049 E15 cortex TGTTGGGAAA (2) 4.9 0.0049 P1 cortex GTATGCATAA 4.5 0.0045 Hypothalamus TGCCCAAGAA (4) 10.9 0.0109 Hypothalamus GTGATATTTA 9.1 0.0091 Hypothalamus GGGGGGGGGA (14) 3.6 0.0036 Hypothalamus GTATGCATAA 1.8 0.0018 E12.5 retina ACTTGTTCTC (2) 3.8 0.0038 E12.5 retina GGGGGGGGGA (14) 3.8 0.0038 E12.5 retina GTGATATTTA 3.8 0.0038 E12.5 retina TGTTGGGAAA (2) 1.9 0.0019 E14.5 retina TGTTGGGAAA (2) 16.4 0.0164 E14.5 retina GTGATATTTA 1.8 0.0018 E14.5 retina TGCCCAAGAA (4) 1.8 0.0018 E16.5 retina TGTTGGGAAA (2) 3.6 0.0036 E18.5 retina GGGGGGGGGA (14) 1.8 0.0018 E18.5 retina GTGATATTTA 1.8 0.0018 E18.5 retina TGGTCCATAT (5) 1.8 0.0018 E18.5 retina TGTTGGGAAA (2) 1.8 0.0018 P0.5 retina TGCCCAAGAA (4) 3.9 0.0039 P0.5 retina ACTTGTTCTC (2) 2 0.002 P0.5 retina GATATCCCTG (2) 2 0.002 P0.5 retina GTATGCATAA 2 0.002 P0.5 retina TGGTCCATAT (5) 2 0.002 P0.5 retina TGTTGGGAAA (2) 2 0.002 P2.5 retina GTGATATTTA 3.5 0.0035 P2.5 retina TGGTCCATAT (5) 1.8 0.0018 P2.5 retina TGTTGGGAAA (2) 1.8 0.0018 P4.5 retina TGTTGGGAAA (2) 5.9 0.0059 P4.5 retina GTGATATTTA 4 0.004 P4.5 retina GATATCCCTG (2) 2 0.002 P4.5 retina GGGGGGGGGA (14) 2 0.002 P4.5 retina TGGTCCATAT (5) 2 0.002 P6.5 retina TGCCCAAGAA (4) 1.7 0.0017 P6.5 retina TGGTCCATAT (5) 1.7 0.0017 P6.5 retina TGTTGGGAAA (2) 1.7 0.0017 P10.5 crx- retina TGTTGGGAAA (2) 5.6 0.0056 P10.5 crx- retina ACTTGTTCTC (2) 1.9 0.0019 P10.5 crx- retina GGGGGGGGGA (14) 1.9 0.0019 P10.5 crx- retina GTGATATTTA 1.9 0.0019 P10.5 crx- retina TGGTCCATAT (5) 1.9 0.0019 P10.5 crx+ retina TGTTGGGAAA (2) 7.7 0.0077 Adult retinal GTGATATTTA 3.7 0.0037 Adult retinal TGCCCAAGAA (4) 3.7 0.0037 Adult retinal GTATGCATAA 1.9 0.0019 ONL GTGATATTTA 1.9 0.0019 ONL TGGTCCATAT (5) 1.9 0.0019