Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.27670	Txnl5	thioredoxin-like 5	11	11 38.0 cM	52700
Gene Ontology	electron transport | electron transporter activity
Human Homolog	TXNL5[thioredoxin-like 5]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 76 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CCTTTAATCC (355) 52.2 0.0522 P8 Cb GC CCTTTATTCC (18) 3.3 0.0033 P8 Cb GC CTTTTAATCC (33) 3.3 0.0033 P8 Cb GC CCTTTAGTCC (27) 1.6 0.0016 Cb medulloblastoma CCTTTAATCC (355) 41.6 0.0416 P8 GC+1d culture CCTTTAATCC (355) 32 0.032 P8 GC+1d culture CCTTTAGTCC (27) 10.3 0.0103 P8 GC+1d culture CCTTTATTCC (18) 6.8 0.0068 P8 GC+1d culture CCTTTGGTCC (8) 2.3 0.0023 P8 GC+1d culture CCTTTACTCC (4) 1.1 0.0011 P8 GC+1d culture CTTTTAATCC (33) 1.1 0.0011 P8 GC+SHH+1d culture CCTTTAATCC (355) 25.8 0.0258 P8 GC+SHH+1d culture CCTTTAGTCC (27) 3.5 0.0035 P8 GC+SHH+1d culture CCTTTGGTCC (8) 2.3 0.0023 P8 GC+SHH+1d culture CCTTTATTCC (18) 1.2 0.0012 P8 GC+SHH+1d culture CTTTTAATCC (33) 1.2 0.0012 3T3 fibroblasts CCTTTAATCC (355) 70.1 0.0701 E15 cortex CCTTTAATCC (355) 54.4 0.0544 E15 cortex CCTTTAGTCC (27) 9.9 0.0099 P1 cortex CCTTTAATCC (355) 154.5 0.1545 P1 cortex CCTTTAGTCC (27) 27.3 0.0273 P1 cortex CCTTTATTCC (18) 27.3 0.0273 P1 cortex CCTTTGGTCC (8) 4.5 0.0045 P1 cortex CTTTTAATCC (33) 4.5 0.0045 Hypothalamus CCTTTAATCC (355) 19.9 0.0199 Hypothalamus CCTTTAGTCC (27) 3.6 0.0036 E12.5 retina CCTTTAATCC (355) 75.1 0.0751 E12.5 retina CCTTTACTCC (4) 5.6 0.0056 E12.5 retina CCTTTAGTCC (27) 5.6 0.0056 E12.5 retina CCTTTATTCC (18) 5.6 0.0056 E12.5 retina CTTTTAATCC (33) 1.9 0.0019 E14.5 retina CCTTTAATCC (355) 120.3 0.1203 E14.5 retina CCTTTAGTCC (27) 14.6 0.0146 E14.5 retina CCTTTATTCC (18) 12.8 0.0128 E14.5 retina CCTTTGGTCC (8) 1.8 0.0018 E14.5 retina CTTTTAATCC (33) 1.8 0.0018 E16.5 retina CCTTTAATCC (355) 68.8 0.0688 E16.5 retina CTTTTAATCC (33) 7.2 0.0072 E16.5 retina CCTTTAGTCC (27) 5.4 0.0054 E16.5 retina CCTTTATTCC (18) 3.6 0.0036 E16.5 retina CCTTTACTCC (4) 1.8 0.0018 E16.5 retina CCTTTGGTCC (8) 1.8 0.0018 E18.5 retina CCTTTAATCC (355) 23.6 0.0236 E18.5 retina CCTTTATTCC (18) 7.3 0.0073 E18.5 retina CCTTTAGTCC (27) 5.5 0.0055 P0.5 retina CCTTTAATCC (355) 72.6 0.0726 P0.5 retina CCTTTAGTCC (27) 7.9 0.0079 P0.5 retina CCTTTACTCC (4) 2 0.002 P0.5 retina CCTTTATTCC (18) 2 0.002 P2.5 retina CCTTTAATCC (355) 70.4 0.0704 P2.5 retina CCTTTAGTCC (27) 5.3 0.0053 P2.5 retina CCTTTGGTCC (8) 5.3 0.0053 P2.5 retina CCTTTATTCC (18) 3.5 0.0035 P4.5 retina CCTTTAATCC (355) 43.6 0.0436 P4.5 retina CCTTTATTCC (18) 7.9 0.0079 P4.5 retina CCTTTAGTCC (27) 4 0.004 P4.5 retina CCTTTACTCC (4) 2 0.002 P6.5 retina CCTTTAATCC (355) 70 0.07 P6.5 retina CCTTTATTCC (18) 5 0.005 P6.5 retina CCTTTAGTCC (27) 3.3 0.0033 P10.5 crx- retina CCTTTAATCC (355) 63.2 0.0632 P10.5 crx- retina CCTTTATTCC (18) 3.7 0.0037 P10.5 crx- retina CTTTTAATCC (33) 3.7 0.0037 P10.5 crx- retina CCTTTAGTCC (27) 1.9 0.0019 P10.5 crx+ retina CCTTTAATCC (355) 38.4 0.0384 P10.5 crx+ retina CCTTTATTCC (18) 7.7 0.0077 P10.5 crx+ retina CCTTTAGTCC (27) 5.8 0.0058 Adult retinal CCTTTAATCC (355) 129.6 0.1296 Adult retinal CCTTTAGTCC (27) 3.7 0.0037 Adult retinal CTTTTAATCC (33) 3.7 0.0037 Adult retinal CCTTTATTCC (18) 1.9 0.0019 ONL CCTTTAATCC (355) 84.3 0.0843 ONL CCTTTAGTCC (27) 7.7 0.0077 ONL CTTTTAATCC (33) 5.7 0.0057 ONL CCTTTATTCC (18) 1.9 0.0019 ONL CCTTTGGTCC (8) 1.9 0.0019