Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.276736	Cpd	carboxypeptidase D	11	11 46.0 cM	12874
Gene Ontology	carboxypeptidase A activity | carboxypeptidase activity | extracellular space | hydrolase activity | integral to membrane | metallocarboxypeptidase activity | proteolysis and peptidolysis | zinc ion binding
Human Homolog	CPD[carboxypeptidase D]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 166 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CAAAAAAAAA (157) 47.3 0.0473 P8 Cb GC CACTGTCCCT (2) 26.1 0.0261 P8 Cb GC AAATAAAACA (10) 17.9 0.0179 P8 Cb GC TTAAGCTCGT (2) 8.2 0.0082 P8 Cb GC CCTCCCAGTG (3) 6.5 0.0065 P8 Cb GC CACTGTGCCT (3) 4.9 0.0049 P8 Cb GC CAGTCAGGCT (7) 4.9 0.0049 P8 Cb GC CCTCCAGTGT (2) 3.3 0.0033 P8 Cb GC AGTTCCAGGA (11) 1.6 0.0016 Cb medulloblastoma CAAAAAAAAA (157) 92.5 0.0925 Cb medulloblastoma AAATAAAACA (10) 39.3 0.0393 Cb medulloblastoma CACTGTCCCT (2) 9.2 0.0092 Cb medulloblastoma CAGTCAGGCT (7) 2.3 0.0023 Cb medulloblastoma CCTCCCAGTG (3) 2.3 0.0023 Cb medulloblastoma CCTTGGTCAC (2) 2.3 0.0023 Cb medulloblastoma TTAAGCTCGT (2) 2.3 0.0023 P8 GC+1d culture CACTGTCCCT (2) 84.5 0.0845 P8 GC+1d culture CAAAAAAAAA (157) 37.7 0.0377 P8 GC+1d culture AAATAAAACA (10) 13.7 0.0137 P8 GC+1d culture CCTCCCAGTG (3) 10.3 0.0103 P8 GC+1d culture TATCTCAATG (3) 4.6 0.0046 P8 GC+1d culture AATAAATACC (7) 2.3 0.0023 P8 GC+1d culture AGTTCCAGGA (11) 2.3 0.0023 P8 GC+1d culture CACTGTGCCT (3) 1.1 0.0011 P8 GC+1d culture CAGAGAAGCA 1.1 0.0011 P8 GC+1d culture CCTTGGTCAC (2) 1.1 0.0011 P8 GC+1d culture TTAAGCTCGT (2) 1.1 0.0011 P8 GC+SHH+1d culture CAAAAAAAAA (157) 58.5 0.0585 P8 GC+SHH+1d culture CACTGTCCCT (2) 42.2 0.0422 P8 GC+SHH+1d culture AAATAAAACA (10) 29.3 0.0293 P8 GC+SHH+1d culture CCTCCCAGTG (3) 9.4 0.0094 P8 GC+SHH+1d culture AATAAATACC (7) 5.9 0.0059 P8 GC+SHH+1d culture TTAAGCTCGT (2) 5.9 0.0059 P8 GC+SHH+1d culture AGTTCCAGGA (11) 2.3 0.0023 P8 GC+SHH+1d culture CACTGTGCCT (3) 2.3 0.0023 P8 GC+SHH+1d culture TATCTCAATG (3) 2.3 0.0023 P8 GC+SHH+1d culture GAAAGAACCA (3) 1.2 0.0012 P8 GC+SHH+1d culture GTTTTTGTTA (6) 1.2 0.0012 E15 cortex CAAAAAAAAA (157) 34.6 0.0346 E15 cortex CACTGTCCCT (2) 14.8 0.0148 E15 cortex CCTCCCAGTG (3) 9.9 0.0099 E15 cortex TATCTCAATG (3) 9.9 0.0099 E15 cortex AAATAAAACA (10) 4.9 0.0049 E15 cortex CACTGTGCCT (3) 4.9 0.0049 P1 cortex CACTGTCCCT (2) 40.9 0.0409 P1 cortex CAAAAAAAAA (157) 22.7 0.0227 P1 cortex AAATAAAACA (10) 9.1 0.0091 P1 cortex CAGAGAAGCA 4.5 0.0045 P1 cortex CAGTCAGGCT (7) 4.5 0.0045 Hypothalamus AAATAAAACA (10) 48.9 0.0489 Hypothalamus CAAAAAAAAA (157) 39.8 0.0398 Hypothalamus AATAAATACC (7) 3.6 0.0036 Hypothalamus CACTGTCCCT (2) 3.6 0.0036 Hypothalamus CCTCCCAGTG (3) 3.6 0.0036 Hypothalamus TATCTCAATG (3) 3.6 0.0036 Hypothalamus TTAAGCTCGT (2) 3.6 0.0036 Hypothalamus CACTGTGCCT (3) 1.8 0.0018 Hypothalamus CAGAGAAGCA 1.8 0.0018 Hypothalamus GTTTTTGTTA (6) 1.8 0.0018 E12.5 retina AAATAAAACA (10) 24.4 0.0244 E12.5 retina CAAAAAAAAA (157) 22.5 0.0225 E12.5 retina CACTGTCCCT (2) 7.5 0.0075 E12.5 retina CCTCCAGTGT (2) 5.6 0.0056 E12.5 retina CCTCCCAGTG (3) 5.6 0.0056 E12.5 retina AATAAATACC (7) 1.9 0.0019 E12.5 retina AGTTCCAGGA (11) 1.9 0.0019 E12.5 retina CAGTCAGGCT (7) 1.9 0.0019 E12.5 retina CCTTGGTCAC (2) 1.9 0.0019 E12.5 retina GAAAGAACCA (3) 1.9 0.0019 E12.5 retina TTAAGCTCGT (2) 1.9 0.0019 E14.5 retina AAATAAAACA (10) 34.6 0.0346 E14.5 retina CAAAAAAAAA (157) 9.1 0.0091 E14.5 retina CACTGTCCCT (2) 7.3 0.0073 E14.5 retina CCTCCCAGTG (3) 7.3 0.0073 E14.5 retina TTAAGCTCGT (2) 5.5 0.0055 E14.5 retina AATAAATACC (7) 3.6 0.0036 E14.5 retina AGTTCCAGGA (11) 1.8 0.0018 E14.5 retina CCTCCAGTGT (2) 1.8 0.0018 E14.5 retina CCTTGGTCAC (2) 1.8 0.0018 E14.5 retina TATCTCAATG (3) 1.8 0.0018 E16.5 retina AAATAAAACA (10) 29 0.029 E16.5 retina CACTGTCCCT (2) 14.5 0.0145 E16.5 retina CAAAAAAAAA (157) 9.1 0.0091 E16.5 retina CCTCCCAGTG (3) 7.2 0.0072 E16.5 retina TTAAGCTCGT (2) 7.2 0.0072 E16.5 retina AATAAATACC (7) 1.8 0.0018 E16.5 retina TATCTCAATG (3) 1.8 0.0018 E18.5 retina AAATAAAACA (10) 52.8 0.0528 E18.5 retina CAAAAAAAAA (157) 41.8 0.0418 E18.5 retina CACTGTCCCT (2) 9.1 0.0091 E18.5 retina AGTTCCAGGA (11) 3.6 0.0036 E18.5 retina TTAAGCTCGT (2) 3.6 0.0036 E18.5 retina CCTCCCAGTG (3) 1.8 0.0018 P0.5 retina CAAAAAAAAA (157) 137.4 0.1374 P0.5 retina CACTGTCCCT (2) 19.6 0.0196 P0.5 retina AAATAAAACA (10) 7.9 0.0079 P0.5 retina CCTCCCAGTG (3) 7.9 0.0079 P0.5 retina TTAAGCTCGT (2) 7.9 0.0079 P0.5 retina AGTTCCAGGA (11) 2 0.002 P0.5 retina CACTGTGCCT (3) 2 0.002 P0.5 retina CCTTGGTCAC (2) 2 0.002 P0.5 retina TATCTCAATG (3) 2 0.002 P2.5 retina CAAAAAAAAA (157) 52.8 0.0528 P2.5 retina CACTGTCCCT (2) 17.6 0.0176 P2.5 retina AAATAAAACA (10) 15.8 0.0158 P2.5 retina CCTCCCAGTG (3) 8.8 0.0088 P2.5 retina TTAAGCTCGT (2) 7 0.007 P2.5 retina GTTTTTGTTA (6) 3.5 0.0035 P2.5 retina TATCTCAATG (3) 3.5 0.0035 P2.5 retina AATAAATACC (7) 1.8 0.0018 P2.5 retina AGTTCCAGGA (11) 1.8 0.0018 P2.5 retina CCTCCAGTGT (2) 1.8 0.0018 P2.5 retina GAAAGAACCA (3) 1.8 0.0018 P4.5 retina CAAAAAAAAA (157) 41.6 0.0416 P4.5 retina AAATAAAACA (10) 25.8 0.0258 P4.5 retina CACTGTCCCT (2) 25.8 0.0258 P4.5 retina AGTTCCAGGA (11) 7.9 0.0079 P4.5 retina TTAAGCTCGT (2) 5.9 0.0059 P4.5 retina CCTCCAGTGT (2) 4 0.004 P4.5 retina CCTCCCAGTG (3) 2 0.002 P4.5 retina CCTTGGTCAC (2) 2 0.002 P4.5 retina TATCTCAATG (3) 2 0.002 P6.5 retina CACTGTCCCT (2) 43.4 0.0434 P6.5 retina AAATAAAACA (10) 41.7 0.0417 P6.5 retina CAAAAAAAAA (157) 31.7 0.0317 P6.5 retina CCTCCCAGTG (3) 6.7 0.0067 P6.5 retina TTAAGCTCGT (2) 5 0.005 P6.5 retina AATAAATACC (7) 3.3 0.0033 P6.5 retina AGTTCCAGGA (11) 3.3 0.0033 P6.5 retina CCTCCAGTGT (2) 1.7 0.0017 P6.5 retina GAAAGAACCA (3) 1.7 0.0017 P6.5 retina GTTTTTGTTA (6) 1.7 0.0017 P6.5 retina TATCTCAATG (3) 1.7 0.0017 P10.5 crx- retina CACTGTCCCT (2) 35.3 0.0353 P10.5 crx- retina AAATAAAACA (10) 26 0.026 P10.5 crx- retina TTAAGCTCGT (2) 16.7 0.0167 P10.5 crx- retina CAAAAAAAAA (157) 13 0.013 P10.5 crx- retina AATAAATACC (7) 5.6 0.0056 P10.5 crx- retina AGTTCCAGGA (11) 1.9 0.0019 P10.5 crx- retina CACTGTGCCT (3) 1.9 0.0019 P10.5 crx- retina CAGAGAAGCA 1.9 0.0019 P10.5 crx- retina CCTCCCAGTG (3) 1.9 0.0019 P10.5 crx+ retina CAAAAAAAAA (157) 32.7 0.0327 P10.5 crx+ retina AAATAAAACA (10) 21.1 0.0211 P10.5 crx+ retina TTAAGCTCGT (2) 13.5 0.0135 P10.5 crx+ retina CACTGTCCCT (2) 11.5 0.0115 P10.5 crx+ retina CCTCCCAGTG (3) 5.8 0.0058 P10.5 crx+ retina CAGTCAGGCT (7) 3.8 0.0038 P10.5 crx+ retina AATAAATACC (7) 1.9 0.0019 P10.5 crx+ retina AGTTCCAGGA (11) 1.9 0.0019 P10.5 crx+ retina CACTGTGCCT (3) 1.9 0.0019 P10.5 crx+ retina CCTCCAGTGT (2) 1.9 0.0019 Adult retinal CAAAAAAAAA (157) 20.4 0.0204 Adult retinal CACTGTCCCT (2) 7.4 0.0074 Adult retinal TTAAGCTCGT (2) 7.4 0.0074 Adult retinal CCTCCCAGTG (3) 5.6 0.0056 Adult retinal AAATAAAACA (10) 3.7 0.0037 Adult retinal AATAAATACC (7) 1.9 0.0019 Adult retinal AGTTCCAGGA (11) 1.9 0.0019 Adult retinal GAAAGAACCA (3) 1.9 0.0019 ONL AAATAAAACA (10) 32.6 0.0326 ONL CAAAAAAAAA (157) 17.2 0.0172 ONL AGTTCCAGGA (11) 9.6 0.0096 ONL AATAAATACC (7) 3.8 0.0038 ONL CACTGTCCCT (2) 1.9 0.0019 ONL CACTGTGCCT (3) 1.9 0.0019