Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.276762	Trpm2	transient receptor potential cation channel, subfamily M, member 2	10	10 41.7 cM	28240
Gene Ontology	integral to membrane | ion channel activity | ion transport | receptor activity | transport
Human Homolog	TRPM2[transient receptor potential cation channel, subfamily M, member 2]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 57 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TTCAAAAAAA (25) 13.1 0.0131 P8 Cb GC ATCCAAAGGA (2) 3.3 0.0033 P8 Cb GC CCCCAGCCCC (3) 1.6 0.0016 P8 Cb GC TTAAATAAAA (8) 1.6 0.0016 P8 Cb GC TTCTGATTAA (3) 1.6 0.0016 Cb medulloblastoma TTCAAAAAAA (25) 37 0.037 Cb medulloblastoma TTGTAAAAAA (3) 6.9 0.0069 Cb medulloblastoma TATGATCAAT (2) 4.6 0.0046 Cb medulloblastoma TTCTGATTAA (3) 2.3 0.0023 P8 GC+1d culture TTCAAAAAAA (25) 12.6 0.0126 P8 GC+1d culture TTAAATAAAA (8) 2.3 0.0023 P8 GC+1d culture TATGATCAAT (2) 1.1 0.0011 P8 GC+1d culture TTCTGATTAA (3) 1.1 0.0011 P8 GC+1d culture TTGTAAAAAA (3) 1.1 0.0011 P8 GC+SHH+1d culture TTCAAAAAAA (25) 29.3 0.0293 P8 GC+SHH+1d culture TTAAATAAAA (8) 1.2 0.0012 P8 GC+SHH+1d culture TTGTAAAAAA (3) 1.2 0.0012 3T3 fibroblasts CCCCAGCCCC (3) 3.5 0.0035 E15 cortex TTCAAAAAAA (25) 29.7 0.0297 P1 cortex TTAAATAAAA (8) 9.1 0.0091 P1 cortex TTCAAAAAAA (25) 4.5 0.0045 Hypothalamus TTCAAAAAAA (25) 7.2 0.0072 Hypothalamus TTGTAAAAAA (3) 5.4 0.0054 Hypothalamus CCCCAGCCCC (3) 1.8 0.0018 Hypothalamus TATGATCAAT (2) 1.8 0.0018 Hypothalamus TTCTGATTAA (3) 1.8 0.0018 E12.5 retina TTCAAAAAAA (25) 9.4 0.0094 E14.5 retina TTCAAAAAAA (25) 20 0.02 E16.5 retina TTCAAAAAAA (25) 9.1 0.0091 E16.5 retina CCCCAGCCCC (3) 1.8 0.0018 E18.5 retina TTCAAAAAAA (25) 36.4 0.0364 E18.5 retina TTAAATAAAA (8) 3.6 0.0036 E18.5 retina TTGTAAAAAA (3) 1.8 0.0018 P0.5 retina TTCAAAAAAA (25) 9.8 0.0098 P0.5 retina ATCCAAAGGA (2) 2 0.002 P0.5 retina CCCTCCCTCA (5) 2 0.002 P0.5 retina TTAAATAAAA (8) 2 0.002 P2.5 retina TTCAAAAAAA (25) 7 0.007 P2.5 retina TTAAATAAAA (8) 3.5 0.0035 P4.5 retina TTCAAAAAAA (25) 31.7 0.0317 P4.5 retina ATCCAAAGGA (2) 2 0.002 P4.5 retina CCCTCCCTCA (5) 2 0.002 P6.5 retina TTCAAAAAAA (25) 8.3 0.0083 P6.5 retina TTAAATAAAA (8) 1.7 0.0017 P6.5 retina TTCTGATTAA (3) 1.7 0.0017 P10.5 crx- retina TTCAAAAAAA (25) 5.6 0.0056 P10.5 crx- retina CCCCAGCCCC (3) 1.9 0.0019 P10.5 crx- retina TTAAATAAAA (8) 1.9 0.0019 P10.5 crx+ retina TTCAAAAAAA (25) 9.6 0.0096 P10.5 crx+ retina CCCTCCCTCA (5) 3.8 0.0038 Adult retinal CCCCAGCCCC (3) 5.6 0.0056 Adult retinal TTCAAAAAAA (25) 5.6 0.0056 Adult retinal CCCTCCCTCA (5) 1.9 0.0019 ONL TTAAATAAAA (8) 3.8 0.0038 ONL TTCAAAAAAA (25) 3.8 0.0038 ONL CCCCAGCCCC (3) 1.9 0.0019 ONL CCCTCCCTCA (5) 1.9 0.0019