Mouse Retina SAGE Library

[Home]    [Libraries]    [Images]

---

Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

---

UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.277024	Copb1	coatomer protein complex, subunit beta 1	7	7 53.3 cM	70349
Gene Ontology	Golgi apparatus | membrane | protein transport | transport
Human Homolog	COPB[coatomer protein complex, subunit beta]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 77 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CTCCACTATG 3.3 0.0033 P8 Cb GC AAGGCAGACA (3) 1.6 0.0016 P8 Cb GC CGAAAAAAAA (12) 1.6 0.0016 P8 Cb GC CTGAATGCAT 1.6 0.0016 Cb medulloblastoma AGAAGCAGTT (2) 20.8 0.0208 Cb medulloblastoma AAGGCAGACA (3) 4.6 0.0046 Cb medulloblastoma CGAAAAAAAA (12) 4.6 0.0046 Cb medulloblastoma CTGAATGCAT 2.3 0.0023 Cb medulloblastoma TGGATCCTGG (11) 2.3 0.0023 P8 GC+1d culture CTGAATGCAT 5.7 0.0057 P8 GC+1d culture AAGGCAGACA (3) 2.3 0.0023 P8 GC+1d culture AGAAGCAGTT (2) 2.3 0.0023 P8 GC+1d culture CTCCACTATG 1.1 0.0011 P8 GC+1d culture TGGATCCTGG (11) 1.1 0.0011 P8 GC+SHH+1d culture AAGGCAGACA (3) 2.3 0.0023 P8 GC+SHH+1d culture CGAAAAAAAA (12) 1.2 0.0012 P8 GC+SHH+1d culture CTGAATGCAT 1.2 0.0012 P8 GC+SHH+1d culture TGGATCCTGG (11) 1.2 0.0012 3T3 fibroblasts AAGGCAGACA (3) 3.5 0.0035 3T3 fibroblasts TGGATCCTGG (11) 3.5 0.0035 E15 cortex CGAAAAAAAA (12) 14.8 0.0148 E15 cortex AGAAGCAGTT (2) 4.9 0.0049 P1 cortex AGAAGCAGTT (2) 9.1 0.0091 Hypothalamus AGAAGCAGTT (2) 5.4 0.0054 Hypothalamus TGGATCCTGG (11) 5.4 0.0054 E12.5 retina AGAAGCAGTT (2) 5.6 0.0056 E12.5 retina CTGAATGCAT 5.6 0.0056 E12.5 retina AAGGCAGACA (3) 1.9 0.0019 E12.5 retina CGAAAAAAAA (12) 1.9 0.0019 E14.5 retina CTCCACTATG 51 0.051 E14.5 retina TGGATCCTGG (11) 3.6 0.0036 E14.5 retina CGAAAAAAAA (12) 1.8 0.0018 E14.5 retina CTGAATGCAT 1.8 0.0018 E16.5 retina CTCCACTATG 7.2 0.0072 E16.5 retina AAGGCAGACA (3) 1.8 0.0018 E16.5 retina AGAAGCAGTT (2) 1.8 0.0018 E16.5 retina CGAAAAAAAA (12) 1.8 0.0018 E16.5 retina TGGATCCTGG (11) 1.8 0.0018 E18.5 retina CGAAAAAAAA (12) 3.6 0.0036 E18.5 retina CTCCACTATG 3.6 0.0036 E18.5 retina AAGGCAGACA (3) 1.8 0.0018 P0.5 retina CGAAAAAAAA (12) 7.9 0.0079 P0.5 retina CTGAATGCAT 5.9 0.0059 P0.5 retina AAGGCAGACA (3) 2 0.002 P0.5 retina AGAAGCAGTT (2) 2 0.002 P0.5 retina CTCCACTATG 2 0.002 P0.5 retina TGGATCCTGG (11) 2 0.002 P2.5 retina CGAAAAAAAA (12) 7 0.007 P2.5 retina CTGAATGCAT 3.5 0.0035 P2.5 retina TGGATCCTGG (11) 1.8 0.0018 P4.5 retina CGAAAAAAAA (12) 13.9 0.0139 P4.5 retina AAGGCAGACA (3) 4 0.004 P4.5 retina AGAAGCAGTT (2) 4 0.004 P4.5 retina CTGAATGCAT 4 0.004 P4.5 retina TGGATCCTGG (11) 4 0.004 P6.5 retina AAGGCAGACA (3) 5 0.005 P6.5 retina AGAAGCAGTT (2) 3.3 0.0033 P6.5 retina CGAAAAAAAA (12) 1.7 0.0017 P6.5 retina CTCCACTATG 1.7 0.0017 P6.5 retina CTGAATGCAT 1.7 0.0017 P6.5 retina TGGATCCTGG (11) 1.7 0.0017 P10.5 crx- retina TGGATCCTGG (11) 13 0.013 P10.5 crx- retina CTGAATGCAT 9.3 0.0093 P10.5 crx- retina CTCCACTATG 5.6 0.0056 P10.5 crx- retina AAGGCAGACA (3) 1.9 0.0019 P10.5 crx+ retina TGGATCCTGG (11) 9.6 0.0096 P10.5 crx+ retina AAGGCAGACA (3) 3.8 0.0038 P10.5 crx+ retina CGAAAAAAAA (12) 3.8 0.0038 P10.5 crx+ retina CTCCACTATG 3.8 0.0038 P10.5 crx+ retina CTGAATGCAT 3.8 0.0038 P10.5 crx+ retina AGAAGCAGTT (2) 1.9 0.0019 Adult retinal AGAAGCAGTT (2) 9.3 0.0093 Adult retinal CTGAATGCAT 3.7 0.0037 Adult retinal CTCCACTATG 1.9 0.0019 Adult retinal TGGATCCTGG (11) 1.9 0.0019 ONL CTCCACTATG 15.3 0.0153 ONL AGAAGCAGTT (2) 1.9 0.0019