Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.277091
Pabpc4
poly A binding protein, cytoplasmic 4
4
230721
Mm.277091
Pabpc4l
poly(A)-binding protein, cytoplasmic pseudogene
14
328451
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 37 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
CCAAGAAAGA
(
4
)
1.6
0.0016
P8 Cb GC
GCATCCAGCT
(
6
)
1.6
0.0016
P8 Cb GC
GGAGGAAGAA (
5
)
1.6
0.0016
P8 GC+1d culture
GCATCCAGCT
(
6
)
2.3
0.0023
P8 GC+1d culture
ATAGAAAAAA (
5
)
1.1
0.0011
P8 GC+1d culture
GGAGGAAGAA (
5
)
1.1
0.0011
P8 GC+SHH+1d culture
GCATCCAGCT
(
6
)
4.7
0.0047
P8 GC+SHH+1d culture
ATAGAAAAAA (
5
)
1.2
0.0012
P8 GC+SHH+1d culture
GGGTGCTCTG (
4
)
1.2
0.0012
3T3 fibroblasts
GCATCCAGCT
(
6
)
3.5
0.0035
E15 cortex
GCATCCAGCT
(
6
)
14.8
0.0148
P1 cortex
ATAGAAAAAA (
5
)
4.5
0.0045
Hypothalamus
CCAAGAAAGA
(
4
)
1.8
0.0018
E14.5 retina
GCATCCAGCT
(
6
)
3.6
0.0036
E16.5 retina
CTCAGGGAAG (
5
)
3.6
0.0036
E16.5 retina
GCATCCAGCT
(
6
)
3.6
0.0036
E16.5 retina
AAGTAAATAA
(
4
)
1.8
0.0018
E16.5 retina
CCAAGAAAGA
(
4
)
1.8
0.0018
P0.5 retina
GGGTGCTCTG (
4
)
3.9
0.0039
P0.5 retina
AAGTAAATAA
(
4
)
2
0.002
P0.5 retina
GCATCCAGCT
(
6
)
2
0.002
P2.5 retina
GCATCCAGCT
(
6
)
3.5
0.0035
P6.5 retina
CTCAGGGAAG (
5
)
1.7
0.0017
P6.5 retina
GGAGGAAGAA (
5
)
1.7
0.0017
P10.5 crx- retina
AAGTAAATAA
(
4
)
14.9
0.0149
P10.5 crx- retina
CCAAGAAAGA
(
4
)
1.9
0.0019
P10.5 crx- retina
CTCAGGGAAG (
5
)
1.9
0.0019
P10.5 crx- retina
GCATCCAGCT
(
6
)
1.9
0.0019
P10.5 crx- retina
GGAGGAAGAA (
5
)
1.9
0.0019
P10.5 crx+ retina
AAGTAAATAA
(
4
)
3.8
0.0038
P10.5 crx+ retina
GCATCCAGCT
(
6
)
1.9
0.0019
P10.5 crx+ retina
GGGTGCTCTG (
4
)
1.9
0.0019
Adult retinal
GCATCCAGCT
(
6
)
5.6
0.0056
Adult retinal
ATAGAAAAAA (
5
)
1.9
0.0019
Adult retinal
CTCAGGGAAG (
5
)
1.9
0.0019
ONL
GCATCCAGCT
(
6
)
1.9
0.0019
ONL
GGGTGCTCTG (
4
)
1.9
0.0019
