Mouse Retina SAGE Library

[Home]    [Libraries]    [Images]

---

Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

---

UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.277349	Park7	Parkinson disease (autosomal recessive, early onset) 7	4		57320
Gene Ontology	cell proliferation | cellular_component unknown | RNA binding
Human Homolog	PARK7[Parkinson disease (autosomal recessive, early onset) 7]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 63 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GCCAACCAAG (2) 4.9 0.0049 P8 Cb GC CGGCGAGCCG 3.3 0.0033 P8 Cb GC TAGCCCAGGC (30) 1.6 0.0016 P8 Cb GC TCGGCCGCCC (15) 1.6 0.0016 Cb medulloblastoma GCCAACCAAG (2) 13.9 0.0139 Cb medulloblastoma TAGCCCAGGC (30) 4.6 0.0046 Cb medulloblastoma CGGCGAGCCG 2.3 0.0023 P8 GC+1d culture GCCAACCAAG (2) 14.8 0.0148 P8 GC+1d culture CGGCGAGCCG 1.1 0.0011 P8 GC+1d culture TAGCCCAGGC (30) 1.1 0.0011 P8 GC+SHH+1d culture GCCAACCAAG (2) 10.5 0.0105 P8 GC+SHH+1d culture TAGCCCAGGC (30) 8.2 0.0082 P8 GC+SHH+1d culture TCGGCCGCCC (15) 2.3 0.0023 P8 GC+SHH+1d culture TCTTTCCCCA (4) 2.3 0.0023 P8 GC+SHH+1d culture ATAGCCAGGG (5) 1.2 0.0012 3T3 fibroblasts TAGCCCAGGC (30) 14 0.014 3T3 fibroblasts GCCAACCAAG (2) 3.5 0.0035 E15 cortex TAGCCCAGGC (30) 24.7 0.0247 E15 cortex GCCAACCAAG (2) 9.9 0.0099 E15 cortex CGGCGAGCCG 4.9 0.0049 P1 cortex GCCAACCAAG (2) 18.2 0.0182 Hypothalamus TAGCCCAGGC (30) 7.2 0.0072 Hypothalamus GCCAACCAAG (2) 5.4 0.0054 Hypothalamus ATAGCCAGGG (5) 1.8 0.0018 E12.5 retina GCCAACCAAG (2) 15 0.015 E12.5 retina TAGCCCAGGC (30) 7.5 0.0075 E12.5 retina CGGCGAGCCG 5.6 0.0056 E12.5 retina TCTTTCCCCA (4) 1.9 0.0019 E14.5 retina TAGCCCAGGC (30) 12.8 0.0128 E14.5 retina GCCAACCAAG (2) 9.1 0.0091 E14.5 retina TCGGCCGCCC (15) 3.6 0.0036 E16.5 retina GCCAACCAAG (2) 16.3 0.0163 E16.5 retina TAGCCCAGGC (30) 7.2 0.0072 E16.5 retina ATAGCCAGGG (5) 1.8 0.0018 E16.5 retina ATTACGCCAA (233) 1.8 0.0018 E16.5 retina TCTTTCCCCA (4) 1.8 0.0018 E18.5 retina TAGCCCAGGC (30) 7.3 0.0073 E18.5 retina GCCAACCAAG (2) 3.6 0.0036 E18.5 retina CGGCGAGCCG 1.8 0.0018 P0.5 retina GCCAACCAAG (2) 27.5 0.0275 P0.5 retina TAGCCCAGGC (30) 5.9 0.0059 P0.5 retina ATTACGCCAA (233) 2 0.002 P0.5 retina TCTTTCCCCA (4) 2 0.002 P2.5 retina GCCAACCAAG (2) 8.8 0.0088 P2.5 retina TAGCCCAGGC (30) 8.8 0.0088 P2.5 retina TCTTTCCCCA (4) 1.8 0.0018 P4.5 retina GCCAACCAAG (2) 7.9 0.0079 P4.5 retina TAGCCCAGGC (30) 2 0.002 P6.5 retina GCCAACCAAG (2) 11.7 0.0117 P6.5 retina TAGCCCAGGC (30) 5 0.005 P6.5 retina TCGGCCGCCC (15) 1.7 0.0017 P10.5 crx- retina GCCAACCAAG (2) 13 0.013 P10.5 crx- retina CGGCGAGCCG 1.9 0.0019 P10.5 crx- retina TAGCCCAGGC (30) 1.9 0.0019 P10.5 crx+ retina GCCAACCAAG (2) 13.5 0.0135 P10.5 crx+ retina CGGCGAGCCG 5.8 0.0058 P10.5 crx+ retina TAGCCCAGGC (30) 3.8 0.0038 Adult retinal GCCAACCAAG (2) 11.1 0.0111 Adult retinal ATTACGCCAA (233) 3.7 0.0037 Adult retinal ATAGCCAGGG (5) 1.9 0.0019 Adult retinal TAGCCCAGGC (30) 1.9 0.0019 ONL GCCAACCAAG (2) 26.8 0.0268 ONL TAGCCCAGGC (30) 9.6 0.0096