Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.277403	Stat5a	signal transducer and activator of transcription 5A	11	11 60.5 cM	20850
Gene Ontology	copper ion binding | cytoplasm | DNA binding | electron transport | electron transporter activity | intracellular signaling cascade | lactation | nucleus | protein binding | regulation of cell adhesion | regulation of epithelial cell differentiation | regulation of transcription, DNA-dependent | signal transducer activity | signal transduction | transcription factor activity
Human Homolog	STAT5A[signal transducer and activator of transcription 5A]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 81 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CCTGTAATCC (34) 6.5 0.0065 P8 Cb GC TCTGTGTCCT (9) 6.5 0.0065 P8 Cb GC AGGGCCATCC (3) 1.6 0.0016 P8 Cb GC GTGGGTTCAA (4) 1.6 0.0016 P8 Cb GC TGGGAGAACA (5) 1.6 0.0016 Cb medulloblastoma AGGGCCATCC (3) 23.1 0.0231 Cb medulloblastoma CCTGTAATCC (34) 11.6 0.0116 Cb medulloblastoma TCTGTGTCCT (9) 4.6 0.0046 Cb medulloblastoma GTGGGTTCAA (4) 2.3 0.0023 P8 GC+1d culture AGGGCCATCC (3) 2.3 0.0023 P8 GC+1d culture GTGGGTTCAA (4) 2.3 0.0023 P8 GC+1d culture TGGGAGAACA (5) 2.3 0.0023 P8 GC+1d culture CCTGTAATCC (34) 1.1 0.0011 P8 GC+1d culture TCTGTGTCCT (9) 1.1 0.0011 P8 GC+SHH+1d culture CCTGTAATCC (34) 4.7 0.0047 P8 GC+SHH+1d culture TCTGTGTCCT (9) 3.5 0.0035 P8 GC+SHH+1d culture TGGGAGAACA (5) 2.3 0.0023 P8 GC+SHH+1d culture AGGGCCATCC (3) 1.2 0.0012 P8 GC+SHH+1d culture GTGGGTTCAA (4) 1.2 0.0012 3T3 fibroblasts AGGGCCATCC (3) 10.5 0.0105 3T3 fibroblasts CCTGTAATCC (34) 10.5 0.0105 E15 cortex AGGGCCATCC (3) 4.9 0.0049 E15 cortex CCTGTAATCC (34) 4.9 0.0049 E15 cortex TCTGTGTCCT (9) 4.9 0.0049 E15 cortex TGGGAGAACA (5) 4.9 0.0049 P1 cortex CCTGTAATCC (34) 13.6 0.0136 P1 cortex TGGGAGAACA (5) 9.1 0.0091 P1 cortex TCTGTGTCCT (9) 4.5 0.0045 Hypothalamus TGGGAGAACA (5) 16.3 0.0163 Hypothalamus AGGGCCATCC (3) 14.5 0.0145 Hypothalamus CCTGTAATCC (34) 5.4 0.0054 Hypothalamus GTGGGTTCAA (4) 1.8 0.0018 Hypothalamus TCTGTGTCCT (9) 1.8 0.0018 E12.5 retina TGGGAGAACA (5) 63.8 0.0638 E12.5 retina TCTGTGTCCT (9) 5.6 0.0056 E12.5 retina CCTGTAATCC (34) 3.8 0.0038 E12.5 retina GTGGGTTCAA (4) 1.9 0.0019 E14.5 retina TGGGAGAACA (5) 72.9 0.0729 E14.5 retina CCTGTAATCC (34) 5.5 0.0055 E14.5 retina TCTGTGTCCT (9) 3.6 0.0036 E14.5 retina AGGGCCATCC (3) 1.8 0.0018 E16.5 retina TGGGAGAACA (5) 126.8 0.1268 E16.5 retina TCTGTGTCCT (9) 9.1 0.0091 E16.5 retina CCTGTAATCC (34) 3.6 0.0036 E18.5 retina TGGGAGAACA (5) 163.7 0.1637 E18.5 retina TCTGTGTCCT (9) 3.6 0.0036 E18.5 retina CCTGTAATCC (34) 1.8 0.0018 P0.5 retina TGGGAGAACA (5) 123.6 0.1236 P0.5 retina AGGGCCATCC (3) 5.9 0.0059 P0.5 retina GTGGGTTCAA (4) 5.9 0.0059 P0.5 retina CCTGTAATCC (34) 3.9 0.0039 P0.5 retina TCTGTGTCCT (9) 2 0.002 P2.5 retina TGGGAGAACA (5) 170.7 0.1707 P2.5 retina TCTGTGTCCT (9) 8.8 0.0088 P2.5 retina CCTGTAATCC (34) 3.5 0.0035 P2.5 retina AGGGCCATCC (3) 1.8 0.0018 P2.5 retina GTGGGTTCAA (4) 1.8 0.0018 P4.5 retina TGGGAGAACA (5) 122.8 0.1228 P4.5 retina CCTGTAATCC (34) 5.9 0.0059 P4.5 retina TCTGTGTCCT (9) 5.9 0.0059 P4.5 retina AGGGCCATCC (3) 4 0.004 P4.5 retina GTGGGTTCAA (4) 2 0.002 P6.5 retina TGGGAGAACA (5) 35 0.035 P6.5 retina TCTGTGTCCT (9) 6.7 0.0067 P6.5 retina GTGGGTTCAA (4) 3.3 0.0033 P6.5 retina AGGGCCATCC (3) 1.7 0.0017 P6.5 retina CCTGTAATCC (34) 1.7 0.0017 P10.5 crx- retina TGGGAGAACA (5) 18.6 0.0186 P10.5 crx- retina AGGGCCATCC (3) 9.3 0.0093 P10.5 crx- retina CCTGTAATCC (34) 3.7 0.0037 P10.5 crx- retina TCTGTGTCCT (9) 3.7 0.0037 P10.5 crx+ retina TGGGAGAACA (5) 7.7 0.0077 P10.5 crx+ retina AGGGCCATCC (3) 3.8 0.0038 P10.5 crx+ retina CCTGTAATCC (34) 3.8 0.0038 P10.5 crx+ retina GTGGGTTCAA (4) 1.9 0.0019 P10.5 crx+ retina TCTGTGTCCT (9) 1.9 0.0019 Adult retinal AGGGCCATCC (3) 3.7 0.0037 Adult retinal CCTGTAATCC (34) 3.7 0.0037 Adult retinal TCTGTGTCCT (9) 1.9 0.0019 Adult retinal TGGGAGAACA (5) 1.9 0.0019 ONL CCTGTAATCC (34) 3.8 0.0038