Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.277599
Stub1
STIP1 homology and U-Box containing protein 1
17
17 11.6 cM
56424
Mm.277599
2310040B03Rik
RIKEN cDNA 2310040B03 gene
17
69636
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 113 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
GGGTCAAAGG (
6
)
55.5
0.0555
P8 Cb GC
AGCCTCCCTT
(
5
)
6.5
0.0065
P8 Cb GC
CCACCACCGA
(
4
)
1.6
0.0016
P8 Cb GC
GTTCTGGTGG
(
7
)
1.6
0.0016
P8 Cb GC
TACCGGTTGT
(
3
)
1.6
0.0016
P8 Cb GC
TCCTGCTGGC (
5
)
1.6
0.0016
Cb medulloblastoma
GGGTCAAAGG (
6
)
9.2
0.0092
Cb medulloblastoma
AGCCTCCCTT
(
5
)
4.6
0.0046
Cb medulloblastoma
CCACCACCGA
(
4
)
4.6
0.0046
Cb medulloblastoma
TACCGGTTGT
(
3
)
4.6
0.0046
Cb medulloblastoma
GCAGATATGG
(
3
)
2.3
0.0023
Cb medulloblastoma
GTCCAGCAAG (
4
)
2.3
0.0023
P8 GC+1d culture
GGGTCAAAGG (
6
)
63.9
0.0639
P8 GC+1d culture
AGCCTCCCTT
(
5
)
5.7
0.0057
P8 GC+1d culture
TACCGGTTGT
(
3
)
4.6
0.0046
P8 GC+1d culture
ACCCTCGTGG
(
3
)
2.3
0.0023
P8 GC+1d culture
CCACCACCGA
(
4
)
1.1
0.0011
P8 GC+1d culture
GCAGATATGG
(
3
)
1.1
0.0011
P8 GC+1d culture
GTTGTGGTGG
(
4
)
1.1
0.0011
P8 GC+1d culture
TCCTGCCTGG
(
11
)
1.1
0.0011
P8 GC+SHH+1d culture
GGGTCAAAGG (
6
)
58.5
0.0585
P8 GC+SHH+1d culture
TACCGGTTGT
(
3
)
5.9
0.0059
P8 GC+SHH+1d culture
AGCCTCCCTT
(
5
)
3.5
0.0035
P8 GC+SHH+1d culture
ACCCTCGTGG
(
3
)
2.3
0.0023
P8 GC+SHH+1d culture
CCACCACCGA
(
4
)
1.2
0.0012
P8 GC+SHH+1d culture
GCAGATATGG
(
3
)
1.2
0.0012
3T3 fibroblasts
GGGTCAAAGG (
6
)
14
0.014
3T3 fibroblasts
GCCAAGTTGG (
6
)
3.5
0.0035
E15 cortex
GGGTCAAAGG (
6
)
29.7
0.0297
E15 cortex
TCCTGCCTGG
(
11
)
9.9
0.0099
E15 cortex
AGCCTCCCTT
(
5
)
4.9
0.0049
E15 cortex
CCACCACCGA
(
4
)
4.9
0.0049
P1 cortex
GGGTCAAAGG (
6
)
22.7
0.0227
P1 cortex
TACCGGTTGT
(
3
)
4.5
0.0045
Hypothalamus
AGCCTCCCTT
(
5
)
10.9
0.0109
Hypothalamus
TACCGGTTGT
(
3
)
7.2
0.0072
Hypothalamus
GCAGATATGG
(
3
)
5.4
0.0054
Hypothalamus
GGGTCAAAGG (
6
)
3.6
0.0036
E12.5 retina
GGGTCAAAGG (
6
)
22.5
0.0225
E12.5 retina
AGCCTCCCTT
(
5
)
13.1
0.0131
E12.5 retina
TACCGGTTGT
(
3
)
13.1
0.0131
E12.5 retina
GTTGTGGTGG
(
4
)
3.8
0.0038
E12.5 retina
GTCCAGCAAG (
4
)
1.9
0.0019
E12.5 retina
GTTCTGGTGG
(
7
)
1.9
0.0019
E14.5 retina
AGCCTCCCTT
(
5
)
3.6
0.0036
E14.5 retina
GGGTCAAAGG (
6
)
3.6
0.0036
E14.5 retina
ACCCTCGTGG
(
3
)
1.8
0.0018
E14.5 retina
CCACCACCGA
(
4
)
1.8
0.0018
E14.5 retina
GCTTACCTTG (
6
)
1.8
0.0018
E14.5 retina
GTCCAGCAAG (
4
)
1.8
0.0018
E16.5 retina
GGGTCAAAGG (
6
)
30.8
0.0308
E16.5 retina
CCACCACCGA
(
4
)
5.4
0.0054
E16.5 retina
TACCGGTTGT
(
3
)
5.4
0.0054
E16.5 retina
AGCCTCCCTT
(
5
)
3.6
0.0036
E16.5 retina
TCCTGCTGGC (
5
)
1.8
0.0018
E18.5 retina
GGGTCAAAGG (
6
)
38.2
0.0382
E18.5 retina
TACCGGTTGT
(
3
)
7.3
0.0073
E18.5 retina
AGCCTCCCTT
(
5
)
5.5
0.0055
E18.5 retina
CCACCACCGA
(
4
)
1.8
0.0018
E18.5 retina
GGGCAGTGCC (
3
)
1.8
0.0018
E18.5 retina
GTTGTGGTGG
(
4
)
1.8
0.0018
P0.5 retina
GGGTCAAAGG (
6
)
51
0.051
P0.5 retina
AGCCTCCCTT
(
5
)
5.9
0.0059
P0.5 retina
CCACCACCGA
(
4
)
2
0.002
P0.5 retina
GTTCTGGTGG
(
7
)
2
0.002
P0.5 retina
TCCTGCCTGG
(
11
)
2
0.002
P2.5 retina
GGGTCAAAGG (
6
)
40.5
0.0405
P2.5 retina
TACCGGTTGT
(
3
)
14.1
0.0141
P2.5 retina
AGCCTCCCTT
(
5
)
8.8
0.0088
P2.5 retina
GCAGATATGG
(
3
)
1.8
0.0018
P2.5 retina
GCTTACCTTG (
6
)
1.8
0.0018
P2.5 retina
GTTCTGGTGG
(
7
)
1.8
0.0018
P4.5 retina
GGGTCAAAGG (
6
)
29.7
0.0297
P4.5 retina
TACCGGTTGT
(
3
)
11.9
0.0119
P4.5 retina
AGCCTCCCTT
(
5
)
4
0.004
P4.5 retina
CCACCACCGA
(
4
)
4
0.004
P4.5 retina
GCCAAGTTGG (
6
)
2
0.002
P6.5 retina
GGGTCAAAGG (
6
)
11.7
0.0117
P6.5 retina
AGCCTCCCTT
(
5
)
10
0.01
P6.5 retina
TACCGGTTGT
(
3
)
6.7
0.0067
P6.5 retina
CCACCACCGA
(
4
)
3.3
0.0033
P6.5 retina
GCTTACCTTG (
6
)
3.3
0.0033
P6.5 retina
GGGCAGTGCC (
3
)
3.3
0.0033
P6.5 retina
GTTCTGGTGG
(
7
)
1.7
0.0017
P6.5 retina
TCCTGCTGGC (
5
)
1.7
0.0017
P10.5 crx- retina
GGGTCAAAGG (
6
)
65
0.065
P10.5 crx- retina
TACCGGTTGT
(
3
)
11.1
0.0111
P10.5 crx- retina
GTTCTGGTGG
(
7
)
3.7
0.0037
P10.5 crx- retina
AGCCTCCCTT
(
5
)
1.9
0.0019
P10.5 crx- retina
CCACCACCGA
(
4
)
1.9
0.0019
P10.5 crx- retina
GCTTACCTTG (
6
)
1.9
0.0019
P10.5 crx+ retina
GGGTCAAAGG (
6
)
36.5
0.0365
P10.5 crx+ retina
GGGCAGTGCC (
3
)
13.5
0.0135
P10.5 crx+ retina
CCACCACCGA
(
4
)
5.8
0.0058
P10.5 crx+ retina
TACCGGTTGT
(
3
)
5.8
0.0058
P10.5 crx+ retina
GTCCAGCAAG (
4
)
1.9
0.0019
P10.5 crx+ retina
GTTGTGGTGG
(
4
)
1.9
0.0019
P10.5 crx+ retina
TCCTGCTGGC (
5
)
1.9
0.0019
Adult retinal
GGGTCAAAGG (
6
)
24.1
0.0241
Adult retinal
AGCCTCCCTT
(
5
)
13
0.013
Adult retinal
GGGCAGTGCC (
3
)
9.3
0.0093
Adult retinal
TACCGGTTGT
(
3
)
3.7
0.0037
Adult retinal
CCACCACCGA
(
4
)
1.9
0.0019
Adult retinal
GCCAAGTTGG (
6
)
1.9
0.0019
Adult retinal
GTTCTGGTGG
(
7
)
1.9
0.0019
Adult retinal
TCCTGCTGGC (
5
)
1.9
0.0019
ONL
GGGCAGTGCC (
3
)
30.6
0.0306
ONL
GGGTCAAAGG (
6
)
9.6
0.0096
ONL
CCACCACCGA
(
4
)
3.8
0.0038
ONL
TACCGGTTGT
(
3
)
3.8
0.0038
ONL
ACCCTCGTGG
(
3
)
1.9
0.0019
ONL
GTTCTGGTGG
(
7
)
1.9
0.0019
ONL
TCCTGCTGGC (
5
)
1.9
0.0019
