Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.277683
2210404G23Rik
RIKEN cDNA 2210404G23 gene
6
67088
Gene Ontology
nucleus
|
TATA-binding protein binding
Human Homolog
TIP120B[TBP-interacting protein]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 45 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
TTTTATGTTT
(
3
)
179.4
0.1794
P8 Cb GC
CAAGCCTGCT
(
7
)
1.6
0.0016
Cb medulloblastoma
TTTTATGTTT
(
3
)
30.1
0.0301
Cb medulloblastoma
AGAACAAAGC (
2
)
4.6
0.0046
Cb medulloblastoma
CACACAAGCC (
9
)
2.3
0.0023
P8 GC+1d culture
TTTTATGTTT
(
3
)
161
0.161
P8 GC+1d culture
CACACAAGCC (
9
)
4.6
0.0046
P8 GC+SHH+1d culture
TTTTATGTTT
(
3
)
149.9
0.1499
P8 GC+SHH+1d culture
CACACAAGCC (
9
)
2.3
0.0023
3T3 fibroblasts
TTTTATGTTT
(
3
)
45.6
0.0456
E15 cortex
CACACAAGCC (
9
)
4.9
0.0049
E15 cortex
TTTTATGTTT
(
3
)
4.9
0.0049
P1 cortex
TTTTATGTTT
(
3
)
95.5
0.0955
P1 cortex
AGAAACTGAG (
3
)
9.1
0.0091
Hypothalamus
TTTTATGTTT
(
3
)
65.2
0.0652
Hypothalamus
CACACAAGCC (
9
)
7.2
0.0072
Hypothalamus
AGAACAAAGC (
2
)
1.8
0.0018
E12.5 retina
TTTTATGTTT
(
3
)
215.9
0.2159
E12.5 retina
CACACAAGCC (
9
)
5.6
0.0056
E12.5 retina
AAACTAAAGG (
5
)
1.9
0.0019
E12.5 retina
GGTAGGGTAT
(
2
)
1.9
0.0019
E14.5 retina
TTTTATGTTT
(
3
)
382.6
0.3826
E14.5 retina
CACACAAGCC (
9
)
12.8
0.0128
E14.5 retina
CAAGCCTGCT
(
7
)
1.8
0.0018
E16.5 retina
TTTTATGTTT
(
3
)
490.8
0.4908
E16.5 retina
CACACAAGCC (
9
)
7.2
0.0072
E16.5 retina
GGTAGGGTAT
(
2
)
3.6
0.0036
E16.5 retina
AAACTAAAGG (
5
)
1.8
0.0018
E18.5 retina
TTTTATGTTT
(
3
)
247.4
0.2474
E18.5 retina
CAAGCCTGCT
(
7
)
1.8
0.0018
E18.5 retina
CACACAAGCC (
9
)
1.8
0.0018
P0.5 retina
TTTTATGTTT
(
3
)
98.1
0.0981
P2.5 retina
TTTTATGTTT
(
3
)
158.4
0.1584
P2.5 retina
CACACAAGCC (
9
)
3.5
0.0035
P2.5 retina
AGAAACTGAG (
3
)
1.8
0.0018
P2.5 retina
GGTAGGGTAT
(
2
)
1.8
0.0018
P4.5 retina
TTTTATGTTT
(
3
)
89.2
0.0892
P6.5 retina
TTTTATGTTT
(
3
)
88.4
0.0884
P6.5 retina
CACACAAGCC (
9
)
5
0.005
P10.5 crx- retina
TTTTATGTTT
(
3
)
243.4
0.2434
P10.5 crx- retina
CACACAAGCC (
9
)
1.9
0.0019
P10.5 crx+ retina
TTTTATGTTT
(
3
)
44.2
0.0442
Adult retinal
TTTTATGTTT
(
3
)
7.4
0.0074
Adult retinal
GGTAGGGTAT
(
2
)
1.9
0.0019
ONL
TTTTATGTTT
(
3
)
47.9
0.0479
