Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.2777
Tpd52
tumor protein D52
3
3 A1-A2
21985
Human Homolog
TPD52[tumor protein D52]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 117 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
TGGTTTTGGG (
3
)
6.5
0.0065
P8 Cb GC
TGAAAATCTT
(
4
)
4.9
0.0049
P8 Cb GC
AATCATTGTT
(
2
)
1.6
0.0016
P8 Cb GC
ACACAGAGCT (
6
)
1.6
0.0016
P8 Cb GC
CAGACACTCA
1.6
0.0016
P8 Cb GC
GACACTGGTT (
5
)
1.6
0.0016
Cb medulloblastoma
TGGTTTTGGG (
3
)
13.9
0.0139
Cb medulloblastoma
ACACAGAGCT (
6
)
6.9
0.0069
Cb medulloblastoma
TGAAAATCTT
(
4
)
6.9
0.0069
Cb medulloblastoma
AAGTCACTCA (
3
)
4.6
0.0046
Cb medulloblastoma
GTCAGCTGCT (
5
)
2.3
0.0023
P8 GC+1d culture
TGGTTTTGGG (
3
)
17.1
0.0171
P8 GC+1d culture
AAGTCACTCA (
3
)
1.1
0.0011
P8 GC+1d culture
ACACAGAGCT (
6
)
1.1
0.0011
P8 GC+1d culture
GACACTGGTA
(
3
)
1.1
0.0011
P8 GC+1d culture
GATACAAATG
(
3
)
1.1
0.0011
P8 GC+1d culture
TGAAAATCTT
(
4
)
1.1
0.0011
P8 GC+SHH+1d culture
TGGTTTTGGG (
3
)
14.1
0.0141
P8 GC+SHH+1d culture
TCATTTGGTG
(
2
)
3.5
0.0035
P8 GC+SHH+1d culture
GATACAAATG
(
3
)
2.3
0.0023
P8 GC+SHH+1d culture
TAACCACTGT (
2
)
2.3
0.0023
P8 GC+SHH+1d culture
ACACAGAGCT (
6
)
1.2
0.0012
P8 GC+SHH+1d culture
GACACTGGTT (
5
)
1.2
0.0012
P8 GC+SHH+1d culture
GTCAGCTGCT (
5
)
1.2
0.0012
P8 GC+SHH+1d culture
TGAAAATCTT
(
4
)
1.2
0.0012
3T3 fibroblasts
TCATTTGGTG
(
2
)
28
0.028
3T3 fibroblasts
GACACTGGTT (
5
)
10.5
0.0105
3T3 fibroblasts
GTCATAGCTG (
590
)
10.5
0.0105
3T3 fibroblasts
TGGTTTTGGG (
3
)
10.5
0.0105
3T3 fibroblasts
AAGTCACTCA (
3
)
3.5
0.0035
E15 cortex
TGGTTTTGGG (
3
)
9.9
0.0099
E15 cortex
GTCAGCTGCT (
5
)
4.9
0.0049
E15 cortex
GTCATAGCTG (
590
)
4.9
0.0049
P1 cortex
TGGTTTTGGG (
3
)
22.7
0.0227
P1 cortex
TGAAAATTTT
(
2
)
4.5
0.0045
Hypothalamus
TGGTTTTGGG (
3
)
12.7
0.0127
Hypothalamus
TGAAAATCTT
(
4
)
9.1
0.0091
Hypothalamus
AATCATTGTT
(
2
)
1.8
0.0018
Hypothalamus
CTCTGAAAAA (
7
)
1.8
0.0018
Hypothalamus
GTCAGCTGCT (
5
)
1.8
0.0018
Hypothalamus
TCGAGGCCCG (
3
)
1.8
0.0018
E12.5 retina
TGGTTTTGGG (
3
)
16.9
0.0169
E12.5 retina
TGAAAATCTT
(
4
)
7.5
0.0075
E12.5 retina
AAGTCACTCA (
3
)
1.9
0.0019
E12.5 retina
ACACAGAGCT (
6
)
1.9
0.0019
E12.5 retina
CAGACACTCA
1.9
0.0019
E12.5 retina
GTCAGCTGCT (
5
)
1.9
0.0019
E14.5 retina
TGAAAATCTT
(
4
)
23.7
0.0237
E14.5 retina
TGGTTTTGGG (
3
)
16.4
0.0164
E14.5 retina
TCGAGGCCCG (
3
)
5.5
0.0055
E14.5 retina
AAGTCACTCA (
3
)
1.8
0.0018
E14.5 retina
ACACAGAGCT (
6
)
1.8
0.0018
E14.5 retina
GACACTGGTA
(
3
)
1.8
0.0018
E14.5 retina
GACACTGGTT (
5
)
1.8
0.0018
E14.5 retina
GATACAAATG
(
3
)
1.8
0.0018
E14.5 retina
GTCAGCTGCT (
5
)
1.8
0.0018
E14.5 retina
TGAAAATTTT
(
2
)
1.8
0.0018
E16.5 retina
TGAAAATCTT
(
4
)
10.9
0.0109
E16.5 retina
TGGTTTTGGG (
3
)
9.1
0.0091
E16.5 retina
AATCATTGTT
(
2
)
5.4
0.0054
E16.5 retina
GACACTGGTT (
5
)
3.6
0.0036
E16.5 retina
GATACAAATG
(
3
)
3.6
0.0036
E16.5 retina
GTCAGCTGCT (
5
)
1.8
0.0018
E16.5 retina
TCGAGGCCCG (
3
)
1.8
0.0018
E18.5 retina
TGGTTTTGGG (
3
)
23.6
0.0236
E18.5 retina
TGAAAATCTT
(
4
)
20
0.02
E18.5 retina
AATCATTGTT
(
2
)
3.6
0.0036
E18.5 retina
TGAAAATTTT
(
2
)
3.6
0.0036
E18.5 retina
GACACTGGTT (
5
)
1.8
0.0018
P0.5 retina
TGGTTTTGGG (
3
)
19.6
0.0196
P0.5 retina
TGAAAATCTT
(
4
)
9.8
0.0098
P0.5 retina
GTCATAGCTG (
590
)
3.9
0.0039
P0.5 retina
TTTAGGCTGC
3.9
0.0039
P0.5 retina
AATCATTGTT
(
2
)
2
0.002
P0.5 retina
GACACTGGTT (
5
)
2
0.002
P2.5 retina
TGAAAATCTT
(
4
)
29.9
0.0299
P2.5 retina
TGGTTTTGGG (
3
)
12.3
0.0123
P2.5 retina
AATCATTGTT
(
2
)
5.3
0.0053
P2.5 retina
CAGACACTCA
1.8
0.0018
P2.5 retina
GTCATAGCTG (
590
)
1.8
0.0018
P2.5 retina
TTTAGGCTGC
1.8
0.0018
P4.5 retina
TGAAAATCTT
(
4
)
43.6
0.0436
P4.5 retina
TGGTTTTGGG (
3
)
17.8
0.0178
P4.5 retina
TCGAGGCCCG (
3
)
4
0.004
P4.5 retina
AATCATTGTT
(
2
)
2
0.002
P4.5 retina
ACACAGAGCT (
6
)
2
0.002
P4.5 retina
GACACTGGTA
(
3
)
2
0.002
P4.5 retina
GTCATAGCTG (
590
)
2
0.002
P6.5 retina
TGAAAATCTT
(
4
)
25
0.025
P6.5 retina
TGGTTTTGGG (
3
)
23.3
0.0233
P6.5 retina
AATCATTGTT
(
2
)
8.3
0.0083
P6.5 retina
GACACTGGTT (
5
)
3.3
0.0033
P6.5 retina
GTCATAGCTG (
590
)
3.3
0.0033
P6.5 retina
GATACAAATG
(
3
)
1.7
0.0017
P10.5 crx- retina
TGAAAATCTT
(
4
)
18.6
0.0186
P10.5 crx- retina
TGGTTTTGGG (
3
)
9.3
0.0093
P10.5 crx- retina
ACACAGAGCT (
6
)
7.4
0.0074
P10.5 crx- retina
AATCATTGTT
(
2
)
1.9
0.0019
P10.5 crx- retina
CTCTGAAAAA (
7
)
1.9
0.0019
P10.5 crx- retina
TCGAGGCCCG (
3
)
1.9
0.0019
P10.5 crx+ retina
TGAAAATCTT
(
4
)
26.9
0.0269
P10.5 crx+ retina
TGGTTTTGGG (
3
)
25
0.025
P10.5 crx+ retina
AATCATTGTT
(
2
)
1.9
0.0019
Adult retinal
TGAAAATCTT
(
4
)
14.8
0.0148
Adult retinal
TGGTTTTGGG (
3
)
11.1
0.0111
Adult retinal
AATCATTGTT
(
2
)
1.9
0.0019
Adult retinal
ACACAGAGCT (
6
)
1.9
0.0019
Adult retinal
GATACAAATG
(
3
)
1.9
0.0019
Adult retinal
GTCATAGCTG (
590
)
1.9
0.0019
Adult retinal
TAACCACTGT (
2
)
1.9
0.0019
ONL
TGAAAATCTT
(
4
)
11.5
0.0115
ONL
GTCATAGCTG (
590
)
5.7
0.0057
ONL
TAACCACTGT (
2
)
5.7
0.0057
ONL
TGGTTTTGGG (
3
)
5.7
0.0057
ONL
AATCATTGTT
(
2
)
3.8
0.0038
ONL
CAGACACTCA
1.9
0.0019
ONL
GATACAAATG
(
3
)
1.9
0.0019
