Mouse Retina SAGE Library

[Home]    [Libraries]    [Images]

---

Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

---

UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.277812	Vil2	villin 2	17		22350
Gene Ontology	apical part of cell | apical plasma membrane | basal body | cellular morphogenesis | cytoplasm | cytoskeletal protein binding | cytoskeleton | establishment and/or maintenance of apical/basal cell polarity | membrane | protein binding | structural molecule activity
Human Homolog	VIL2[villin 2 (ezrin)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 82 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TAACCGAGAC 6.5 0.0065 P8 Cb GC CTTATCTGTT 3.3 0.0033 P8 Cb GC AGAATTTGGT (6) 1.6 0.0016 P8 Cb GC CTTTATCTTG (2) 1.6 0.0016 P8 Cb GC GAACACACAG (2) 1.6 0.0016 Cb medulloblastoma AGAATTTGGT (6) 6.9 0.0069 Cb medulloblastoma CCTTTGACTT (3) 2.3 0.0023 Cb medulloblastoma CTTATCTGTT 2.3 0.0023 Cb medulloblastoma GAGAGCTTTT (4) 2.3 0.0023 Cb medulloblastoma GGCAGGGAGG (2) 2.3 0.0023 P8 GC+1d culture TAACCGAGAC 4.6 0.0046 P8 GC+1d culture CTTATCTGTT 2.3 0.0023 P8 GC+1d culture GCCGCCCTGC (4) 2.3 0.0023 P8 GC+1d culture AGAATTTGGT (6) 1.1 0.0011 P8 GC+1d culture CCTTTGACTT (3) 1.1 0.0011 P8 GC+1d culture CTTTATCTTG (2) 1.1 0.0011 P8 GC+1d culture GAACACACAG (2) 1.1 0.0011 P8 GC+1d culture GAGAGCTTTT (4) 1.1 0.0011 P8 GC+1d culture GTTTAGACTC 1.1 0.0011 P8 GC+SHH+1d culture TAACCGAGAC 4.7 0.0047 P8 GC+SHH+1d culture CTTATCTGTT 3.5 0.0035 P8 GC+SHH+1d culture CTTTATCTTG (2) 2.3 0.0023 P8 GC+SHH+1d culture GAACACACAG (2) 2.3 0.0023 P8 GC+SHH+1d culture GAGAGCTTTT (4) 1.2 0.0012 P8 GC+SHH+1d culture GCCGCCCTGC (4) 1.2 0.0012 P8 GC+SHH+1d culture GTTTAGACTC 1.2 0.0012 3T3 fibroblasts GAACACACAG (2) 14 0.014 3T3 fibroblasts CTTATCTGTT 3.5 0.0035 3T3 fibroblasts GCCGCCCTGC (4) 3.5 0.0035 E15 cortex TAACCGAGAC 4.9 0.0049 P1 cortex AGAATTTGGT (6) 9.1 0.0091 P1 cortex GAACACACAG (2) 9.1 0.0091 Hypothalamus ACCAAGTTGA (3) 3.6 0.0036 Hypothalamus CTTATCTGTT 1.8 0.0018 Hypothalamus CTTTATCTTG (2) 1.8 0.0018 Hypothalamus GAACACACAG (2) 1.8 0.0018 Hypothalamus GAGAGCTTTT (4) 1.8 0.0018 Hypothalamus GGCAGGGAGG (2) 1.8 0.0018 Hypothalamus GTTTAGACTC 1.8 0.0018 E12.5 retina AGAATTTGGT (6) 5.6 0.0056 E12.5 retina GAACACACAG (2) 3.8 0.0038 E12.5 retina CTTATCTGTT 1.9 0.0019 E12.5 retina CTTTATCTTG (2) 1.9 0.0019 E12.5 retina GAGAGCTTTT (4) 1.9 0.0019 E12.5 retina GGCAGGGAGG (2) 1.9 0.0019 E12.5 retina TAACCGAGAC 1.9 0.0019 E14.5 retina AGAATTTGGT (6) 1.8 0.0018 E14.5 retina CTTTATCTTG (2) 1.8 0.0018 E16.5 retina CTTTATCTTG (2) 3.6 0.0036 E16.5 retina AGAATTTGGT (6) 1.8 0.0018 E18.5 retina CTTTATCTTG (2) 1.8 0.0018 E18.5 retina GGCAGGGAGG (2) 1.8 0.0018 E18.5 retina TAACCGAGAC 1.8 0.0018 P0.5 retina CTTTATCTTG (2) 5.9 0.0059 P0.5 retina GAACACACAG (2) 3.9 0.0039 P0.5 retina CTTATCTGTT 2 0.002 P0.5 retina GTTTAGACTC 2 0.002 P2.5 retina GAACACACAG (2) 8.8 0.0088 P2.5 retina CTTTATCTTG (2) 1.8 0.0018 P2.5 retina GAGAGCTTTT (4) 1.8 0.0018 P2.5 retina GGCAGGGAGG (2) 1.8 0.0018 P4.5 retina GGCAGGGAGG (2) 5.9 0.0059 P4.5 retina CTTTATCTTG (2) 4 0.004 P4.5 retina AGAATTTGGT (6) 2 0.002 P4.5 retina CTTATCTGTT 2 0.002 P4.5 retina TAACCGAGAC 2 0.002 P6.5 retina CTTTATCTTG (2) 3.3 0.0033 P6.5 retina GAACACACAG (2) 1.7 0.0017 P10.5 crx- retina AGAATTTGGT (6) 5.6 0.0056 P10.5 crx- retina CTTTATCTTG (2) 3.7 0.0037 P10.5 crx- retina GAGAGCTTTT (4) 1.9 0.0019 P10.5 crx+ retina CTTTATCTTG (2) 3.8 0.0038 P10.5 crx+ retina GAACACACAG (2) 1.9 0.0019 P10.5 crx+ retina GACCACACAA (2) 1.9 0.0019 Adult retinal AGAATTTGGT (6) 3.7 0.0037 Adult retinal ACCAAGTTGA (3) 1.9 0.0019 Adult retinal CTTTATCTTG (2) 1.9 0.0019 Adult retinal GAGAGCTTTT (4) 1.9 0.0019 Adult retinal GGCAGGGAGG (2) 1.9 0.0019 ONL CCTTTGACTT (3) 3.8 0.0038 ONL GACCACACAA (2) 3.8 0.0038 ONL ACCAAGTTGA (3) 1.9 0.0019