Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.277916	Ptpn1	protein tyrosine phosphatase, non-receptor type 1	2		19246
Gene Ontology	hydrolase activity | integral to membrane | phosphoprotein phosphatase activity | protein amino acid dephosphorylation | protein-tyrosine-phosphatase activity
Human Homolog	PTPN1[protein tyrosine phosphatase, non-receptor type 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 56 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CGCACCATTG (2) 19.6 0.0196 P8 Cb GC GAGAAAGGCT (2) 1.6 0.0016 Cb medulloblastoma CGCACCATTG (2) 13.9 0.0139 Cb medulloblastoma GGTGGCTTTT (4) 2.3 0.0023 P8 GC+1d culture CGCACCATTG (2) 25.1 0.0251 P8 GC+1d culture ACTCTTCTGG (4) 1.1 0.0011 P8 GC+1d culture CTCCAGGCTG (4) 1.1 0.0011 P8 GC+SHH+1d culture CGCACCATTG (2) 17.6 0.0176 P8 GC+SHH+1d culture GCCACGCTCC 3.5 0.0035 P8 GC+SHH+1d culture ACTCTTCTGG (4) 1.2 0.0012 3T3 fibroblasts CGCACCATTG (2) 49.1 0.0491 3T3 fibroblasts GCCACGCTCC 10.5 0.0105 3T3 fibroblasts GAGATGGAGA (6) 3.5 0.0035 E15 cortex CGCACCATTG (2) 24.7 0.0247 E15 cortex GCCACGCTCC 9.9 0.0099 E15 cortex ACTCTTCTGG (4) 4.9 0.0049 E15 cortex CTCCAGGCTG (4) 4.9 0.0049 E15 cortex TTGTTTTTGG (4) 4.9 0.0049 P1 cortex TTGTTTTTGG (4) 9.1 0.0091 P1 cortex GAGAAAGGCT (2) 4.5 0.0045 P1 cortex GCCACGCTCC 4.5 0.0045 Hypothalamus CGCACCATTG (2) 9.1 0.0091 Hypothalamus ATTTCTATGG (6) 1.8 0.0018 Hypothalamus CTCCAGGCTG (4) 1.8 0.0018 E12.5 retina CGCACCATTG (2) 1.9 0.0019 E12.5 retina TTGTTTTTGG (4) 1.9 0.0019 E14.5 retina CGCACCATTG (2) 3.6 0.0036 E14.5 retina GAGATGGAGA (6) 1.8 0.0018 E16.5 retina CGCACCATTG (2) 16.3 0.0163 E16.5 retina ATTTCTATGG (6) 3.6 0.0036 E16.5 retina GGTGGCTTTT (4) 3.6 0.0036 E16.5 retina CTCCAGGCTG (4) 1.8 0.0018 E16.5 retina GAGAAAGGCT (2) 1.8 0.0018 E16.5 retina GAGATGGAGA (6) 1.8 0.0018 E18.5 retina CGCACCATTG (2) 14.6 0.0146 E18.5 retina GCCACGCTCC 3.6 0.0036 E18.5 retina GAGATGGAGA (6) 1.8 0.0018 P0.5 retina CGCACCATTG (2) 19.6 0.0196 P0.5 retina ACTCTTCTGG (4) 5.9 0.0059 P0.5 retina TTGTTTTTGG (4) 3.9 0.0039 P2.5 retina CGCACCATTG (2) 10.6 0.0106 P2.5 retina GGTGGCTTTT (4) 1.8 0.0018 P2.5 retina TTGTTTTTGG (4) 1.8 0.0018 P4.5 retina CGCACCATTG (2) 5.9 0.0059 P4.5 retina GCCACGCTCC 2 0.002 P4.5 retina GGTGGCTTTT (4) 2 0.002 P6.5 retina CGCACCATTG (2) 11.7 0.0117 P10.5 crx- retina CGCACCATTG (2) 33.4 0.0334 P10.5 crx- retina ATTTCTATGG (6) 3.7 0.0037 P10.5 crx- retina TTGTTTTTGG (4) 1.9 0.0019 P10.5 crx+ retina CGCACCATTG (2) 17.3 0.0173 P10.5 crx+ retina GCCACGCTCC 1.9 0.0019 Adult retinal CGCACCATTG (2) 16.7 0.0167 Adult retinal ACTCTTCTGG (4) 1.9 0.0019 ONL ACTCTTCTGG (4) 1.9 0.0019 ONL CGCACCATTG (2) 1.9 0.0019