Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.278578	Suv420h1	suppressor of variegation 4-20 homolog 1 (Drosophila)	19	19 A	225888
Gene Ontology	condensed nuclear chromosome, pericentric region | histone lysine N-methyltransferase activity (H4-K20 specific) | histone methylation
Human Homolog	SUV420H1[suppressor of variegation 4-20 homolog 1 (Drosophila)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 75 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CCTTTAATCC (355) 52.2 0.0522 P8 Cb GC CACTTGCAGT 8.2 0.0082 P8 Cb GC GTGGTGAATG (5) 3.3 0.0033 P8 Cb GC ATGGTAAATG (2) 1.6 0.0016 P8 Cb GC TACAAAATAT (5) 1.6 0.0016 Cb medulloblastoma CCTTTAATCC (355) 41.6 0.0416 Cb medulloblastoma CACTTGCAGT 2.3 0.0023 Cb medulloblastoma TACAAAATAT (5) 2.3 0.0023 Cb medulloblastoma TGGTCGCTGG (2) 2.3 0.0023 P8 GC+1d culture CCTTTAATCC (355) 32 0.032 P8 GC+1d culture CACTTGCAGT 3.4 0.0034 P8 GC+1d culture TTCTTGGAGT (5) 1.1 0.0011 P8 GC+SHH+1d culture CCTTTAATCC (355) 25.8 0.0258 P8 GC+SHH+1d culture CACTTGCAGT 3.5 0.0035 P8 GC+SHH+1d culture AGTCACAGCT (2) 1.2 0.0012 P8 GC+SHH+1d culture TTGTCACCTA (4) 1.2 0.0012 3T3 fibroblasts CCTTTAATCC (355) 70.1 0.0701 E15 cortex CCTTTAATCC (355) 54.4 0.0544 E15 cortex CACTTGCAGT 4.9 0.0049 P1 cortex CCTTTAATCC (355) 154.5 0.1545 Hypothalamus CCTTTAATCC (355) 19.9 0.0199 Hypothalamus CACTTGCAGT 1.8 0.0018 Hypothalamus GTGGTGAATG (5) 1.8 0.0018 Hypothalamus TTCTTGGAGT (5) 1.8 0.0018 Hypothalamus TTGTCACCTA (4) 1.8 0.0018 E12.5 retina CCTTTAATCC (355) 75.1 0.0751 E12.5 retina CACTTGCAGT 1.9 0.0019 E12.5 retina TACAAAATAT (5) 1.9 0.0019 E14.5 retina CCTTTAATCC (355) 120.3 0.1203 E14.5 retina TGGTCGCTGG (2) 9.1 0.0091 E14.5 retina CACTTGCAGT 7.3 0.0073 E14.5 retina AGGAGCTGAG (5) 3.6 0.0036 E14.5 retina TTCTTGGAGT (5) 1.8 0.0018 E16.5 retina CCTTTAATCC (355) 68.8 0.0688 E16.5 retina TGGTCGCTGG (2) 14.5 0.0145 E16.5 retina CACTTGCAGT 7.2 0.0072 E16.5 retina ATGGTAAATG (2) 1.8 0.0018 E16.5 retina GTGGTGAATG (5) 1.8 0.0018 E18.5 retina CCTTTAATCC (355) 23.6 0.0236 E18.5 retina AGGAGCTGAG (5) 3.6 0.0036 E18.5 retina CACTTGCAGT 3.6 0.0036 E18.5 retina GTGGTGAATG (5) 1.8 0.0018 P0.5 retina CCTTTAATCC (355) 72.6 0.0726 P0.5 retina CACTTGCAGT 2 0.002 P0.5 retina GGAAGGTCGG (6) 2 0.002 P0.5 retina GTGGTGAATG (5) 2 0.002 P0.5 retina TGGTCGCTGG (2) 2 0.002 P0.5 retina TTGTCACCTA (4) 2 0.002 P2.5 retina CCTTTAATCC (355) 70.4 0.0704 P2.5 retina CACTTGCAGT 8.8 0.0088 P2.5 retina AGTCACAGCT (2) 1.8 0.0018 P4.5 retina CCTTTAATCC (355) 43.6 0.0436 P4.5 retina CACTTGCAGT 9.9 0.0099 P4.5 retina TGGTCGCTGG (2) 2 0.002 P6.5 retina CCTTTAATCC (355) 70 0.07 P6.5 retina CACTTGCAGT 23.3 0.0233 P6.5 retina TGGTCGCTGG (2) 3.3 0.0033 P6.5 retina ATGGTAAATG (2) 1.7 0.0017 P10.5 crx- retina CCTTTAATCC (355) 63.2 0.0632 P10.5 crx- retina CACTTGCAGT 14.9 0.0149 P10.5 crx- retina AGTCACAGCT (2) 1.9 0.0019 P10.5 crx- retina TACAAAATAT (5) 1.9 0.0019 P10.5 crx+ retina CCTTTAATCC (355) 38.4 0.0384 P10.5 crx+ retina CACTTGCAGT 7.7 0.0077 P10.5 crx+ retina ATGGTAAATG (2) 1.9 0.0019 P10.5 crx+ retina TGGTCGCTGG (2) 1.9 0.0019 Adult retinal CCTTTAATCC (355) 129.6 0.1296 Adult retinal CACTTGCAGT 5.6 0.0056 Adult retinal GGAAGGTCGG (6) 1.9 0.0019 Adult retinal TTGTCACCTA (4) 1.9 0.0019 ONL CCTTTAATCC (355) 84.3 0.0843 ONL AGGAGCTGAG (5) 1.9 0.0019 ONL CACTTGCAGT 1.9 0.0019 ONL GGAAGGTCGG (6) 1.9 0.0019 ONL TGGTCGCTGG (2) 1.9 0.0019