Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.2787	Amacr	alpha-methylacyl-CoA racemase	15		17117
Gene Ontology	alpha-methylacyl-CoA racemase activity | isomerase activity | isoprenoid catabolism | metabolism | mitochondrion | peroxisome
Human Homolog	AMACR[alpha-methylacyl-CoA racemase]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 44 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CTGTAGGTGC (2) 3.3 0.0033 P8 Cb GC GTTGAAGGGA (2) 1.6 0.0016 Cb medulloblastoma TACACACTGG (3) 9.2 0.0092 Cb medulloblastoma GGTCTGGGGA 6.9 0.0069 Cb medulloblastoma TGCACTGCTG (5) 4.6 0.0046 P8 GC+1d culture TACACACTGG (3) 8 0.008 P8 GC+1d culture CTGTAGGTGC (2) 1.1 0.0011 P8 GC+1d culture TGCACTGCTG (5) 1.1 0.0011 P8 GC+SHH+1d culture GCTGTAGGTG 3.5 0.0035 P8 GC+SHH+1d culture TACACACTGG (3) 3.5 0.0035 P8 GC+SHH+1d culture CTGTAGGTGC (2) 1.2 0.0012 P8 GC+SHH+1d culture GTGCTGGGTG (8) 1.2 0.0012 P8 GC+SHH+1d culture TGCACTGCTG (5) 1.2 0.0012 3T3 fibroblasts GTGCTGGGTG (8) 3.5 0.0035 3T3 fibroblasts TGCACTGCTG (5) 3.5 0.0035 E15 cortex GAGAAACTCC (3) 4.9 0.0049 P1 cortex TACACACTGG (3) 4.5 0.0045 Hypothalamus TACACACTGG (3) 12.7 0.0127 Hypothalamus CTGTAGGTGC (2) 1.8 0.0018 E12.5 retina TACACACTGG (3) 3.8 0.0038 E12.5 retina GCTGTAGGTG 1.9 0.0019 E12.5 retina TGCACTGCTG (5) 1.9 0.0019 E14.5 retina TACACACTGG (3) 3.6 0.0036 E14.5 retina CTGTAGGTGC (2) 1.8 0.0018 E14.5 retina GAGAAACTCC (3) 1.8 0.0018 E18.5 retina TGCACTGCTG (5) 1.8 0.0018 P0.5 retina CTGTAGGTGC (2) 2 0.002 P0.5 retina GGTCTGGGGA 2 0.002 P2.5 retina TACACACTGG (3) 8.8 0.0088 P4.5 retina GAGAAACTCC (3) 2 0.002 P4.5 retina GTTGAAGGGA (2) 2 0.002 P4.5 retina TACACACTGG (3) 2 0.002 P6.5 retina GTTGAAGGGA (2) 1.7 0.0017 P6.5 retina TACACACTGG (3) 1.7 0.0017 P6.5 retina TGCACTGCTG (5) 1.7 0.0017 P10.5 crx- retina GTGCTGGGTG (8) 3.7 0.0037 P10.5 crx- retina TACACACTGG (3) 3.7 0.0037 P10.5 crx- retina TGCACTGCTG (5) 3.7 0.0037 P10.5 crx- retina GTTGAAGGGA (2) 1.9 0.0019 P10.5 crx+ retina TACACACTGG (3) 5.8 0.0058 P10.5 crx+ retina TGCACTGCTG (5) 1.9 0.0019 Adult retinal GCTGTAGGTG 5.6 0.0056 Adult retinal TACACACTGG (3) 3.7 0.0037 ONL TACACACTGG (3) 1.9 0.0019