Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.278922	Fubp1	far upstream element (FUSE) binding protein 1	3		51886
Gene Ontology	cytoplasm | DNA binding | nucleic acid binding | nucleus | phosphate transport | regulation of transcription, DNA-dependent | transcription factor activity
Human Homolog	FUBP1[far upstream element (FUSE) binding protein 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 134 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TTCCAGATTG (5) 6.5 0.0065 P8 Cb GC TATGTACTGA (6) 3.3 0.0033 P8 Cb GC TTCAAGGATA 3.3 0.0033 P8 Cb GC ATGGGCCTCA (4) 1.6 0.0016 P8 Cb GC ATTATTGTAA 1.6 0.0016 P8 Cb GC TATTTTAATA (3) 1.6 0.0016 Cb medulloblastoma ATTATTGTAA 4.6 0.0046 Cb medulloblastoma ATGGGCCTCA (4) 2.3 0.0023 Cb medulloblastoma ATTATTGTGA (2) 2.3 0.0023 Cb medulloblastoma GAACATTTAA (3) 2.3 0.0023 Cb medulloblastoma GTGATGGGAC (5) 2.3 0.0023 Cb medulloblastoma TATGTACTGA (6) 2.3 0.0023 P8 GC+1d culture TTCCAGATTG (5) 10.3 0.0103 P8 GC+1d culture TATGTACTGA (6) 5.7 0.0057 P8 GC+1d culture ATTATTGTAA 2.3 0.0023 P8 GC+1d culture CTGCTGATGC (4) 2.3 0.0023 P8 GC+1d culture TTTCCTGCCA (6) 2.3 0.0023 P8 GC+1d culture AATTGTTTAA (2) 1.1 0.0011 P8 GC+1d culture ATGGAGTAGA (2) 1.1 0.0011 P8 GC+1d culture ATGGGCCTCA (4) 1.1 0.0011 P8 GC+1d culture ATTATTGTGA (2) 1.1 0.0011 P8 GC+1d culture GACCATAGAA (3) 1.1 0.0011 P8 GC+1d culture TAACTATTTT (5) 1.1 0.0011 P8 GC+1d culture TGTATACAAA (7) 1.1 0.0011 P8 GC+SHH+1d culture TATGTACTGA (6) 4.7 0.0047 P8 GC+SHH+1d culture ATGGGCCTCA (4) 2.3 0.0023 P8 GC+SHH+1d culture TTCCAGATTG (5) 2.3 0.0023 P8 GC+SHH+1d culture GACCATAGAA (3) 1.2 0.0012 P8 GC+SHH+1d culture GAGAAAATAT (6) 1.2 0.0012 P8 GC+SHH+1d culture GGCCTCCTGG (7) 1.2 0.0012 P8 GC+SHH+1d culture GGGTACAGGT (5) 1.2 0.0012 P8 GC+SHH+1d culture TAACTATTTT (5) 1.2 0.0012 P8 GC+SHH+1d culture TATTTTAATA (3) 1.2 0.0012 P8 GC+SHH+1d culture TGTATACAAT (3) 1.2 0.0012 P8 GC+SHH+1d culture TTTCCTGCCA (6) 1.2 0.0012 3T3 fibroblasts ATGGGCCTCA (4) 14 0.014 3T3 fibroblasts ATGGAGTAGA (2) 3.5 0.0035 3T3 fibroblasts ATTCCAGCCA 3.5 0.0035 3T3 fibroblasts CTGCTGATGC (4) 3.5 0.0035 3T3 fibroblasts GGCCTCCTGG (7) 3.5 0.0035 E15 cortex GGCCTCCTGG (7) 24.7 0.0247 E15 cortex ATTCCAGCCA 14.8 0.0148 E15 cortex CTGCTGATGC (4) 4.9 0.0049 P1 cortex ATGGGCCTCA (4) 13.6 0.0136 P1 cortex TTCAAGGATA 9.1 0.0091 Hypothalamus ATTATTGTGA (2) 7.2 0.0072 Hypothalamus GTGATGGGAC (5) 7.2 0.0072 Hypothalamus TTCCAGATTG (5) 5.4 0.0054 Hypothalamus CTGCTGATGC (4) 3.6 0.0036 Hypothalamus AATGTTAAAG 1.8 0.0018 Hypothalamus ATGGGCCTCA (4) 1.8 0.0018 Hypothalamus GGCCTCCTGG (7) 1.8 0.0018 Hypothalamus TATGTACTGA (6) 1.8 0.0018 Hypothalamus TATTTTAATA (3) 1.8 0.0018 E12.5 retina ATGGGCCTCA (4) 5.6 0.0056 E12.5 retina TATGTACTGA (6) 5.6 0.0056 E12.5 retina ATTATTGTAA 3.8 0.0038 E12.5 retina CAAGAAGCCA (4) 1.9 0.0019 E12.5 retina GGCCTCCTGG (7) 1.9 0.0019 E12.5 retina TTTCCTGCCA (6) 1.9 0.0019 E14.5 retina ATGGGCCTCA (4) 1.8 0.0018 E14.5 retina ATTATTGTAA 1.8 0.0018 E14.5 retina CTGCTGATGC (4) 1.8 0.0018 E14.5 retina GGGTACAGGT (5) 1.8 0.0018 E14.5 retina TAACTATTTT (5) 1.8 0.0018 E14.5 retina TGTATACAAA (7) 1.8 0.0018 E14.5 retina TTTCCTGCCA (6) 1.8 0.0018 E16.5 retina TTCCAGATTG (5) 14.5 0.0145 E16.5 retina AATTGTTTAA (2) 1.8 0.0018 E16.5 retina ATGGGCCTCA (4) 1.8 0.0018 E16.5 retina ATTATTGTAA 1.8 0.0018 E16.5 retina ATTATTGTGA (2) 1.8 0.0018 E16.5 retina TATGTACTGA (6) 1.8 0.0018 E16.5 retina TATTTTAATA (3) 1.8 0.0018 E16.5 retina TTTCCTGCCA (6) 1.8 0.0018 E18.5 retina ATTATTGTAA 3.6 0.0036 E18.5 retina CTGCTGATGC (4) 3.6 0.0036 E18.5 retina ATGGGCCTCA (4) 1.8 0.0018 E18.5 retina GAACATTTAA (3) 1.8 0.0018 E18.5 retina TGTATACAAA (7) 1.8 0.0018 E18.5 retina TTCCAGATTG (5) 1.8 0.0018 P0.5 retina ATTATTGTGA (2) 3.9 0.0039 P0.5 retina CTGCTGATGC (4) 3.9 0.0039 P0.5 retina TTTCCTGCCA (6) 3.9 0.0039 P0.5 retina ATGGAGTAGA (2) 2 0.002 P0.5 retina GACCATAGAA (3) 2 0.002 P0.5 retina GGCCTCCTGG (7) 2 0.002 P0.5 retina TTCCAGATTG (5) 2 0.002 P2.5 retina ATGGGCCTCA (4) 7 0.007 P2.5 retina GGCCTCCTGG (7) 3.5 0.0035 P2.5 retina TTCCAGATTG (5) 3.5 0.0035 P2.5 retina TTTCCTGCCA (6) 3.5 0.0035 P2.5 retina AATGTTAAAG 1.8 0.0018 P2.5 retina ATTATTGTAA 1.8 0.0018 P2.5 retina ATTATTGTGA (2) 1.8 0.0018 P4.5 retina TGTATACAAA (7) 7.9 0.0079 P4.5 retina ATTATTGTAA 4 0.004 P4.5 retina ATTATTGTGA (2) 4 0.004 P4.5 retina CTGCTGATGC (4) 4 0.004 P4.5 retina GGCCTCCTGG (7) 4 0.004 P4.5 retina ATGGAGTAGA (2) 2 0.002 P4.5 retina GACCATAGAA (3) 2 0.002 P6.5 retina TTCCAGATTG (5) 8.3 0.0083 P6.5 retina ATTATTGTGA (2) 6.7 0.0067 P6.5 retina CTGCTGATGC (4) 3.3 0.0033 P6.5 retina ATGGGCCTCA (4) 1.7 0.0017 P6.5 retina TGTATACAAT (3) 1.7 0.0017 P6.5 retina TTCAAGGATA 1.7 0.0017 P10.5 crx- retina ATGGGCCTCA (4) 9.3 0.0093 P10.5 crx- retina TTCCAGATTG (5) 5.6 0.0056 P10.5 crx- retina ATTATTGTGA (2) 3.7 0.0037 P10.5 crx- retina CTGCTGATGC (4) 1.9 0.0019 P10.5 crx- retina TATTTTAATA (3) 1.9 0.0019 P10.5 crx- retina TTTCCTGCCA (6) 1.9 0.0019 P10.5 crx+ retina TTCCAGATTG (5) 7.7 0.0077 P10.5 crx+ retina ATTATTGTAA 3.8 0.0038 P10.5 crx+ retina AATTGTTTAA (2) 1.9 0.0019 P10.5 crx+ retina CAAGAAGCCA (4) 1.9 0.0019 P10.5 crx+ retina CTGCTGATGC (4) 1.9 0.0019 P10.5 crx+ retina GAGAAAATAT (6) 1.9 0.0019 P10.5 crx+ retina TGTATACAAT (3) 1.9 0.0019 Adult retinal ATGGGCCTCA (4) 3.7 0.0037 Adult retinal GGCCTCCTGG (7) 3.7 0.0037 Adult retinal ATTATTGTGA (2) 1.9 0.0019 Adult retinal CTGCTGATGC (4) 1.9 0.0019 Adult retinal GGGTACAGGT (5) 1.9 0.0019 Adult retinal TTTCCTGCCA (6) 1.9 0.0019 ONL AATGTTAAAG 1.9 0.0019 ONL ATGGGCCTCA (4) 1.9 0.0019 ONL ATTATTGTAA 1.9 0.0019 ONL ATTATTGTGA (2) 1.9 0.0019 ONL CAAGAAGCCA (4) 1.9 0.0019 ONL GAACATTTAA (3) 1.9 0.0019 ONL TTCAAGGATA 1.9 0.0019