Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.27943	Slc7a5	solute carrier family 7 (cationic amino acid transporter, y+ system), member 5	8	8 65.0 cM	20539
Gene Ontology	amino acid permease activity | amino acid transport | amino acid transporter activity | amino acid-polyamine transporter activity | carrier activity | integral to membrane | integral to plasma membrane | membrane | transport
Human Homolog	SLC7A5[solute carrier family 7 (cationic amino acid transporter, y+ system), member 5]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 42 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GCTCTCCAGC (7) 57.1 0.0571 P8 Cb GC TCACTGCCCT 3.3 0.0033 Cb medulloblastoma GCTCTCCAGC (7) 161.9 0.1619 Cb medulloblastoma AATCCCTGCC (2) 2.3 0.0023 Cb medulloblastoma GTGCTGACCC (3) 2.3 0.0023 P8 GC+1d culture GCTCTCCAGC (7) 69.6 0.0696 P8 GC+1d culture TCACTGCCCT 3.4 0.0034 P8 GC+SHH+1d culture GCTCTCCAGC (7) 74.9 0.0749 P8 GC+SHH+1d culture TCACTGCCCT 5.9 0.0059 3T3 fibroblasts GCTCTCCAGC (7) 28 0.028 3T3 fibroblasts TCACTGCCCT 10.5 0.0105 E15 cortex GCTCTCCAGC (7) 69.3 0.0693 E15 cortex GTGCTGACCC (3) 4.9 0.0049 P1 cortex GCTCTCCAGC (7) 54.5 0.0545 P1 cortex TCACTGCCCT 9.1 0.0091 Hypothalamus GCTCTCCAGC (7) 77.9 0.0779 Hypothalamus GTGCTGACCC (3) 1.8 0.0018 E12.5 retina GCTCTCCAGC (7) 50.7 0.0507 E14.5 retina GCTCTCCAGC (7) 72.9 0.0729 E14.5 retina TCACTGCCCT 1.8 0.0018 E16.5 retina GCTCTCCAGC (7) 97.8 0.0978 E16.5 retina AATCCCTGCC (2) 1.8 0.0018 E16.5 retina TCACTGCCCT 1.8 0.0018 E18.5 retina GCTCTCCAGC (7) 125.5 0.1255 P0.5 retina GCTCTCCAGC (7) 66.7 0.0667 P0.5 retina TCACTGCCCT 5.9 0.0059 P0.5 retina GTGCTGACCC (3) 2 0.002 P2.5 retina GCTCTCCAGC (7) 75.7 0.0757 P2.5 retina AATCCCTGCC (2) 1.8 0.0018 P2.5 retina TCACTGCCCT 1.8 0.0018 P4.5 retina GCTCTCCAGC (7) 65.4 0.0654 P4.5 retina TCACTGCCCT 2 0.002 P6.5 retina GCTCTCCAGC (7) 81.7 0.0817 P6.5 retina TCACTGCCCT 5 0.005 P10.5 crx- retina GCTCTCCAGC (7) 55.7 0.0557 P10.5 crx- retina TCACTGCCCT 3.7 0.0037 P10.5 crx+ retina GCTCTCCAGC (7) 94.2 0.0942 P10.5 crx+ retina GTGCTGACCC (3) 3.8 0.0038 P10.5 crx+ retina TCACTGCCCT 3.8 0.0038 Adult retinal GCTCTCCAGC (7) 57.4 0.0574 ONL GCTCTCCAGC (7) 28.7 0.0287 ONL TCACTGCCCT 1.9 0.0019