Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.279692	Dnaja2	DnaJ (Hsp40) homolog, subfamily A, member 2	8		56445
Gene Ontology	membrane | protein folding
Human Homolog	DNAJA2[DnaJ (Hsp40) homolog, subfamily A, member 2]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 75 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GTTGTAAAGT 16.3 0.0163 P8 Cb GC GTTGTAAATA (2) 8.2 0.0082 P8 Cb GC TTTACATAGA (2) 3.3 0.0033 P8 Cb GC ACAACAAAAG (5) 1.6 0.0016 P8 Cb GC TGAAGGGACA (2) 1.6 0.0016 Cb medulloblastoma GTTGTAAAGT 11.6 0.0116 Cb medulloblastoma TAGACCAAGG (5) 2.3 0.0023 Cb medulloblastoma TGGGTTATAA 2.3 0.0023 Cb medulloblastoma TTTACATAGA (2) 2.3 0.0023 P8 GC+1d culture GTTGTAAAGT 11.4 0.0114 P8 GC+1d culture GTTGTAAATA (2) 4.6 0.0046 P8 GC+1d culture GAAAAATGGG (3) 1.1 0.0011 P8 GC+1d culture TAGACCAAGG (5) 1.1 0.0011 P8 GC+1d culture TGGGTTATAA 1.1 0.0011 P8 GC+SHH+1d culture GTTGTAAAGT 9.4 0.0094 P8 GC+SHH+1d culture GTTGTAAATA (2) 8.2 0.0082 P8 GC+SHH+1d culture CTCTGATGAG (2) 2.3 0.0023 P8 GC+SHH+1d culture GAAAAAGGGG (6) 1.2 0.0012 3T3 fibroblasts ACAACAAAAG (5) 3.5 0.0035 3T3 fibroblasts CTCTGATGAG (2) 3.5 0.0035 3T3 fibroblasts GAAAAATGGG (3) 3.5 0.0035 3T3 fibroblasts TTTACATAGA (2) 3.5 0.0035 E15 cortex CTCTGATGAG (2) 4.9 0.0049 E15 cortex GACAGGAGGA (9) 4.9 0.0049 E15 cortex GTTGTAAAGT 4.9 0.0049 P1 cortex GTTGTAAAGT 4.5 0.0045 Hypothalamus GGGACTGATT (3) 3.6 0.0036 Hypothalamus GTTGTAAAGT 3.6 0.0036 Hypothalamus GAAAAATGGG (3) 1.8 0.0018 Hypothalamus TGAAGGGACA (2) 1.8 0.0018 E12.5 retina GTTGTAAATA (2) 9.4 0.0094 E12.5 retina GTTGTAAAGT 7.5 0.0075 E12.5 retina ACAACAAAAG (5) 1.9 0.0019 E12.5 retina TGAAGGGACA (2) 1.9 0.0019 E12.5 retina TTTACATAGA (2) 1.9 0.0019 E14.5 retina GTTGTAAATA (2) 14.6 0.0146 E14.5 retina GTTGTAAAGT 3.6 0.0036 E14.5 retina TTTACATAGA (2) 1.8 0.0018 E16.5 retina GTTGTAAATA (2) 21.7 0.0217 E16.5 retina TTTACATAGA (2) 3.6 0.0036 E16.5 retina GAAAAATGGG (3) 1.8 0.0018 E16.5 retina GGGACTGATT (3) 1.8 0.0018 E16.5 retina GTTGTAAAGT 1.8 0.0018 E16.5 retina TGAAGGGACA (2) 1.8 0.0018 E16.5 retina TGGGTTATAA 1.8 0.0018 E18.5 retina GTTGTAAATA (2) 20 0.02 E18.5 retina GTTGTAAAGT 7.3 0.0073 E18.5 retina TTTACATAGA (2) 1.8 0.0018 P0.5 retina GTTGTAAATA (2) 11.8 0.0118 P0.5 retina GTTGTAAAGT 5.9 0.0059 P0.5 retina TGGGTTATAA 2 0.002 P2.5 retina GTTGTAAATA (2) 17.6 0.0176 P2.5 retina CTCTGATGAG (2) 3.5 0.0035 P2.5 retina GTTGTAAAGT 3.5 0.0035 P2.5 retina GACAGGAGGA (9) 1.8 0.0018 P2.5 retina TGGGTTATAA 1.8 0.0018 P4.5 retina GTTGTAAATA (2) 15.9 0.0159 P4.5 retina GTTGTAAAGT 9.9 0.0099 P4.5 retina GAAAAAGGGG (6) 2 0.002 P4.5 retina TGAAGGGACA (2) 2 0.002 P6.5 retina GTTGTAAATA (2) 13.3 0.0133 P6.5 retina GTTGTAAAGT 8.3 0.0083 P6.5 retina TTTACATAGA (2) 3.3 0.0033 P10.5 crx- retina GTTGTAAATA (2) 5.6 0.0056 P10.5 crx- retina TAGACCAAGG (5) 1.9 0.0019 P10.5 crx- retina TTTACATAGA (2) 1.9 0.0019 P10.5 crx+ retina GTTGTAAAGT 15.4 0.0154 P10.5 crx+ retina GTTGTAAATA (2) 7.7 0.0077 P10.5 crx+ retina ACAACAAAAG (5) 1.9 0.0019 P10.5 crx+ retina TTTACATAGA (2) 1.9 0.0019 Adult retinal GTTGTAAAGT 3.7 0.0037 Adult retinal CTCTGATGAG (2) 1.9 0.0019 ONL GTTGTAAATA (2) 7.7 0.0077 ONL TGGGTTATAA 3.8 0.0038 ONL GACAGGAGGA (9) 1.9 0.0019