Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.279713
Nrm
nurim (nuclear envelope membrane protein)
17
106582
Mm.279713
5530401N12Rik
RIKEN cDNA 5530401N12 gene
17
71377
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 51 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
CTGGGCTTGA
(
4
)
3.3
0.0033
P8 Cb GC
AAAGTTATTT
(
4
)
1.6
0.0016
P8 Cb GC
GGCCACCTGG
(
7
)
1.6
0.0016
P8 Cb GC
GGGTTCAGGG
(
3
)
1.6
0.0016
Cb medulloblastoma
GGGGGGGGGG (
112
)
6.9
0.0069
Cb medulloblastoma
CTGGGCTTGA
(
4
)
2.3
0.0023
P8 GC+1d culture
CTGGGCTTGA
(
4
)
4.6
0.0046
P8 GC+1d culture
AAAGTTATTT
(
4
)
2.3
0.0023
P8 GC+1d culture
AGCCGTCTGT
(
2
)
2.3
0.0023
P8 GC+1d culture
GGGGGGGGGG (
112
)
2.3
0.0023
P8 GC+1d culture
TTTCCACCTC
(
3
)
2.3
0.0023
P8 GC+1d culture
GGGTTCAGGG
(
3
)
1.1
0.0011
P8 GC+SHH+1d culture
GGGGGGGGGG (
112
)
7
0.007
P8 GC+SHH+1d culture
TTTCCACCTC
(
3
)
5.9
0.0059
P8 GC+SHH+1d culture
CTGGGCTTGA
(
4
)
4.7
0.0047
P8 GC+SHH+1d culture
AAAGTTATTT
(
4
)
2.3
0.0023
P8 GC+SHH+1d culture
AGCCGTCTGT
(
2
)
1.2
0.0012
3T3 fibroblasts
GGGGGGGGGG (
112
)
3.5
0.0035
3T3 fibroblasts
TTTCCACCTC
(
3
)
3.5
0.0035
E15 cortex
CTGGGCTTGA
(
4
)
9.9
0.0099
E15 cortex
GGGGGGGGGG (
112
)
4.9
0.0049
P1 cortex
CTGGGCTTGA
(
4
)
9.1
0.0091
Hypothalamus
GGGGGGGGGG (
112
)
1.8
0.0018
E12.5 retina
CTGGGCTTGA
(
4
)
5.6
0.0056
E12.5 retina
TTTCCACCTC
(
3
)
5.6
0.0056
E12.5 retina
AAAGTTATTT
(
4
)
1.9
0.0019
E14.5 retina
CTGGGCTTGA
(
4
)
5.5
0.0055
E14.5 retina
AAAGTTATTT
(
4
)
1.8
0.0018
E14.5 retina
GGGTTCAGGG
(
3
)
1.8
0.0018
E16.5 retina
TTTCCACCTC
(
3
)
3.6
0.0036
E18.5 retina
AAAGTTATTT
(
4
)
1.8
0.0018
E18.5 retina
TTTCCACCTC
(
3
)
1.8
0.0018
P0.5 retina
CTGGGCTTGA
(
4
)
13.7
0.0137
P0.5 retina
TTTCCACCTC
(
3
)
9.8
0.0098
P0.5 retina
AAAGTTATTT
(
4
)
2
0.002
P2.5 retina
GGGGGGGGGG (
112
)
7
0.007
P2.5 retina
CTGGGCTTGA
(
4
)
5.3
0.0053
P2.5 retina
TTTCCACCTC
(
3
)
1.8
0.0018
P4.5 retina
GGGGGGGGGG (
112
)
9.9
0.0099
P4.5 retina
CTGGGCTTGA
(
4
)
2
0.002
P6.5 retina
CTGGGCTTGA
(
4
)
3.3
0.0033
P6.5 retina
GGGGGGGGGG (
112
)
3.3
0.0033
P6.5 retina
TTTCCACCTC
(
3
)
1.7
0.0017
P10.5 crx- retina
CTGGGCTTGA
(
4
)
5.6
0.0056
P10.5 crx+ retina
GGGGGGGGGG (
112
)
9.6
0.0096
Adult retinal
CTGGGCTTGA
(
4
)
9.3
0.0093
Adult retinal
GGGGGGGGGG (
112
)
3.7
0.0037
Adult retinal
TTTCCACCTC
(
3
)
1.9
0.0019
ONL
TTTCCACCTC
(
3
)
9.6
0.0096
ONL
GGCCACCTGG
(
7
)
3.8
0.0038
ONL
GGGGGGGGGG (
112
)
1.9
0.0019
