Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.279844
2610003J06Rik
RIKEN cDNA 2610003J06 gene
17
72106
Human Homolog
LOC339123[similar to RIKEN cDNA 2610003J06]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 58 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
AGCCTCCCTT
(
5
)
6.5
0.0065
P8 Cb GC
GCGGCGGCTG (
6
)
1.6
0.0016
P8 Cb GC
TACCGGTTGT
(
3
)
1.6
0.0016
Cb medulloblastoma
AGCCTCCCTT
(
5
)
4.6
0.0046
Cb medulloblastoma
TACCGGTTGT
(
3
)
4.6
0.0046
Cb medulloblastoma
GCAGATATGG
(
3
)
2.3
0.0023
Cb medulloblastoma
GTCCAGCAAG
(
4
)
2.3
0.0023
P8 GC+1d culture
AGCCTCCCTT
(
5
)
5.7
0.0057
P8 GC+1d culture
TACCGGTTGT
(
3
)
4.6
0.0046
P8 GC+1d culture
ACCCTCGTGG
(
3
)
2.3
0.0023
P8 GC+1d culture
GCAGATATGG
(
3
)
1.1
0.0011
P8 GC+1d culture
TCCTGCCTGG
(
11
)
1.1
0.0011
P8 GC+SHH+1d culture
TACCGGTTGT
(
3
)
5.9
0.0059
P8 GC+SHH+1d culture
AGCCTCCCTT
(
5
)
3.5
0.0035
P8 GC+SHH+1d culture
ACCCTCGTGG
(
3
)
2.3
0.0023
P8 GC+SHH+1d culture
GCGGCGGCTG (
6
)
2.3
0.0023
P8 GC+SHH+1d culture
GCAGATATGG
(
3
)
1.2
0.0012
3T3 fibroblasts
GCCAAGTTGG
(
6
)
3.5
0.0035
E15 cortex
TCCTGCCTGG
(
11
)
9.9
0.0099
E15 cortex
AGCCTCCCTT
(
5
)
4.9
0.0049
P1 cortex
TACCGGTTGT
(
3
)
4.5
0.0045
Hypothalamus
AGCCTCCCTT
(
5
)
10.9
0.0109
Hypothalamus
TACCGGTTGT
(
3
)
7.2
0.0072
Hypothalamus
GCAGATATGG
(
3
)
5.4
0.0054
Hypothalamus
GCGGCGGCTG (
6
)
1.8
0.0018
E12.5 retina
AGCCTCCCTT
(
5
)
13.1
0.0131
E12.5 retina
TACCGGTTGT
(
3
)
13.1
0.0131
E12.5 retina
GTCCAGCAAG
(
4
)
1.9
0.0019
E14.5 retina
AGCCTCCCTT
(
5
)
3.6
0.0036
E14.5 retina
ACCCTCGTGG
(
3
)
1.8
0.0018
E14.5 retina
GTCCAGCAAG
(
4
)
1.8
0.0018
E16.5 retina
TACCGGTTGT
(
3
)
5.4
0.0054
E16.5 retina
AGCCTCCCTT
(
5
)
3.6
0.0036
E16.5 retina
GCGGCGGCTG (
6
)
1.8
0.0018
E18.5 retina
TACCGGTTGT
(
3
)
7.3
0.0073
E18.5 retina
AGCCTCCCTT
(
5
)
5.5
0.0055
P0.5 retina
AGCCTCCCTT
(
5
)
5.9
0.0059
P0.5 retina
GCGGCGGCTG (
6
)
3.9
0.0039
P0.5 retina
TCCTGCCTGG
(
11
)
2
0.002
P2.5 retina
TACCGGTTGT
(
3
)
14.1
0.0141
P2.5 retina
AGCCTCCCTT
(
5
)
8.8
0.0088
P2.5 retina
GCAGATATGG
(
3
)
1.8
0.0018
P4.5 retina
TACCGGTTGT
(
3
)
11.9
0.0119
P4.5 retina
AGCCTCCCTT
(
5
)
4
0.004
P4.5 retina
GCCAAGTTGG
(
6
)
2
0.002
P6.5 retina
AGCCTCCCTT
(
5
)
10
0.01
P6.5 retina
TACCGGTTGT
(
3
)
6.7
0.0067
P10.5 crx- retina
TACCGGTTGT
(
3
)
11.1
0.0111
P10.5 crx- retina
GCGGCGGCTG (
6
)
3.7
0.0037
P10.5 crx- retina
AGCCTCCCTT
(
5
)
1.9
0.0019
P10.5 crx+ retina
TACCGGTTGT
(
3
)
5.8
0.0058
P10.5 crx+ retina
GTCCAGCAAG
(
4
)
1.9
0.0019
Adult retinal
AGCCTCCCTT
(
5
)
13
0.013
Adult retinal
GCGGCGGCTG (
6
)
3.7
0.0037
Adult retinal
TACCGGTTGT
(
3
)
3.7
0.0037
Adult retinal
GCCAAGTTGG
(
6
)
1.9
0.0019
ONL
TACCGGTTGT
(
3
)
3.8
0.0038
ONL
ACCCTCGTGG
(
3
)
1.9
0.0019
