Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.279907
Rdbp
RD RNA-binding protein
17
17 18.84 cM
27632
Human Homolog
RDBP[RD RNA binding protein]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 49 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
CCTTTAATCC (
355
)
52.2
0.0522
P8 Cb GC
AAGCTGGATT
(
5
)
3.3
0.0033
Cb medulloblastoma
CCTTTAATCC (
355
)
41.6
0.0416
Cb medulloblastoma
AAGCTGGATT
(
5
)
2.3
0.0023
Cb medulloblastoma
GGAAACCCTG (
10
)
2.3
0.0023
P8 GC+1d culture
CCTTTAATCC (
355
)
32
0.032
P8 GC+1d culture
AAGCTGGATT
(
5
)
6.8
0.0068
P8 GC+1d culture
GGAAACCCTG (
10
)
1.1
0.0011
P8 GC+SHH+1d culture
CCTTTAATCC (
355
)
25.8
0.0258
P8 GC+SHH+1d culture
AAGCTGGATT
(
5
)
2.3
0.0023
3T3 fibroblasts
CCTTTAATCC (
355
)
70.1
0.0701
E15 cortex
CCTTTAATCC (
355
)
54.4
0.0544
E15 cortex
AAGCTGGATT
(
5
)
4.9
0.0049
P1 cortex
CCTTTAATCC (
355
)
154.5
0.1545
P1 cortex
AAGCTGGATT
(
5
)
4.5
0.0045
P1 cortex
TCTGCTGATG
(
9
)
4.5
0.0045
Hypothalamus
CCTTTAATCC (
355
)
19.9
0.0199
E12.5 retina
CCTTTAATCC (
355
)
75.1
0.0751
E12.5 retina
AAGCTGGATT
(
5
)
3.8
0.0038
E12.5 retina
TCTGCTGATG
(
9
)
1.9
0.0019
E14.5 retina
CCTTTAATCC (
355
)
120.3
0.1203
E14.5 retina
AAGCTGGATT
(
5
)
1.8
0.0018
E16.5 retina
CCTTTAATCC (
355
)
68.8
0.0688
E16.5 retina
AAGCTGGATT
(
5
)
5.4
0.0054
E18.5 retina
CCTTTAATCC (
355
)
23.6
0.0236
E18.5 retina
AAGCTGGATT
(
5
)
1.8
0.0018
E18.5 retina
GGAAACCCTG (
10
)
1.8
0.0018
P0.5 retina
CCTTTAATCC (
355
)
72.6
0.0726
P0.5 retina
AAGCTGGATT
(
5
)
5.9
0.0059
P2.5 retina
CCTTTAATCC (
355
)
70.4
0.0704
P2.5 retina
AAGCTGGATT
(
5
)
1.8
0.0018
P4.5 retina
CCTTTAATCC (
355
)
43.6
0.0436
P4.5 retina
AAGCTGGATT
(
5
)
5.9
0.0059
P4.5 retina
TCTGCTGATG
(
9
)
2
0.002
P6.5 retina
CCTTTAATCC (
355
)
70
0.07
P6.5 retina
AAGCTGGATT
(
5
)
3.3
0.0033
P6.5 retina
GGAAACCCTG (
10
)
3.3
0.0033
P10.5 crx- retina
CCTTTAATCC (
355
)
63.2
0.0632
P10.5 crx- retina
AAGCTGGATT
(
5
)
1.9
0.0019
P10.5 crx- retina
GGAAACCCTG (
10
)
1.9
0.0019
P10.5 crx+ retina
CCTTTAATCC (
355
)
38.4
0.0384
P10.5 crx+ retina
AAGCTGGATT
(
5
)
5.8
0.0058
P10.5 crx+ retina
GGAAACCCTG (
10
)
3.8
0.0038
Adult retinal
CCTTTAATCC (
355
)
129.6
0.1296
Adult retinal
AAGCTGGATT
(
5
)
1.9
0.0019
Adult retinal
GGAAACCCTG (
10
)
1.9
0.0019
ONL
CCTTTAATCC (
355
)
84.3
0.0843
ONL
AAGCTGGATG (
4
)
3.8
0.0038
ONL
GGAAACCCTG (
10
)
1.9
0.0019
