Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.28000	Ubxd1	UBX domain containing 1	17		66530
Human Homolog	UBXD1[UBX domain containing 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 58 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TACACACCTG (4) 8.2 0.0082 P8 Cb GC GAGCTGTAAT 6.5 0.0065 Cb medulloblastoma GAGCTGTAAT 9.2 0.0092 Cb medulloblastoma CGGGAGAAAG 2.3 0.0023 P8 GC+1d culture TACACACCTG (4) 16 0.016 P8 GC+1d culture GAGCTGTAAT 6.8 0.0068 P8 GC+1d culture AAAATACATA (3) 2.3 0.0023 P8 GC+1d culture CGGGAGAAAG 2.3 0.0023 P8 GC+SHH+1d culture TACACACCTG (4) 10.5 0.0105 P8 GC+SHH+1d culture CGGGAGAAAG 5.9 0.0059 P8 GC+SHH+1d culture GAGCTGTAAT 4.7 0.0047 P8 GC+SHH+1d culture GCGGCAGCGG (6) 2.3 0.0023 3T3 fibroblasts TACACACCTG (4) 17.5 0.0175 E15 cortex CGGGAGAAAG 4.9 0.0049 E15 cortex TACACACCTG (4) 4.9 0.0049 P1 cortex TACACACCTG (4) 9.1 0.0091 Hypothalamus GAGCTGTAAT 10.9 0.0109 Hypothalamus TACACACCTG (4) 9.1 0.0091 E12.5 retina GAGCTGTAAT 3.8 0.0038 E14.5 retina GAGCTGTAAT 18.2 0.0182 E16.5 retina GAGCTGTAAT 7.2 0.0072 E16.5 retina AAAATACATA (3) 1.8 0.0018 E16.5 retina GCGGCAGCGG (6) 1.8 0.0018 E16.5 retina GTGGTTCCCA (3) 1.8 0.0018 E18.5 retina GAGCTGTAAT 16.4 0.0164 E18.5 retina CGGGAGAAAG 3.6 0.0036 E18.5 retina GTGGTTCCCA (3) 1.8 0.0018 P0.5 retina CGGGAGAAAG 7.9 0.0079 P0.5 retina GAGCTGTAAT 5.9 0.0059 P0.5 retina TACACACCTG (4) 5.9 0.0059 P0.5 retina GTGGTTCCCA (3) 2 0.002 P2.5 retina GAGCTGTAAT 7 0.007 P2.5 retina AAAATACATA (3) 5.3 0.0053 P2.5 retina TACACACCTG (4) 3.5 0.0035 P4.5 retina GAGCTGTAAT 29.7 0.0297 P4.5 retina CGGGAGAAAG 4 0.004 P4.5 retina TACACACCTG (4) 4 0.004 P4.5 retina AAAATACATA (3) 2 0.002 P6.5 retina GAGCTGTAAT 15 0.015 P6.5 retina TACACACCTG (4) 8.3 0.0083 P6.5 retina AAAATACATA (3) 1.7 0.0017 P6.5 retina CGGGAGAAAG 1.7 0.0017 P10.5 crx- retina GAGCTGTAAT 24.2 0.0242 P10.5 crx- retina CGGGAGAAAG 9.3 0.0093 P10.5 crx- retina GCTTTGGTCC (3) 3.7 0.0037 P10.5 crx- retina GTGGTTCCCA (3) 1.9 0.0019 P10.5 crx+ retina GAGCTGTAAT 11.5 0.0115 P10.5 crx+ retina TACACACCTG (4) 9.6 0.0096 P10.5 crx+ retina CGGGAGAAAG 3.8 0.0038 P10.5 crx+ retina GCGGCAGCGG (6) 1.9 0.0019 Adult retinal TACACACCTG (4) 13 0.013 Adult retinal GAGCTGTAAT 7.4 0.0074 Adult retinal CGGGAGAAAG 1.9 0.0019 Adult retinal GCTTTGGTCC (3) 1.9 0.0019 Adult retinal GTGGTTCCCA (3) 1.9 0.0019 ONL GAGCTGTAAT 7.7 0.0077 ONL CGGGAGAAAG 5.7 0.0057 ONL TACACACCTG (4) 3.8 0.0038