Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.280077	Hiat1	hippocampus abundant gene transcript 1	3		15247
Gene Ontology	integral to membrane | membrane | transport | transporter activity
Human Homolog	HIAT1[hippocampus abundant transcript 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 81 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GTGGCTAACA (10) 6.5 0.0065 P8 Cb GC AAAATATTTA (6) 1.6 0.0016 P8 Cb GC TATTTATATT (4) 1.6 0.0016 P8 Cb GC TGGAAACTTA (2) 1.6 0.0016 Cb medulloblastoma GTGGCTAACA (10) 13.9 0.0139 Cb medulloblastoma GAAACTGGAA (5) 4.6 0.0046 Cb medulloblastoma AAAATATTTA (6) 2.3 0.0023 Cb medulloblastoma GGTGTTCTGA (3) 2.3 0.0023 Cb medulloblastoma TGGAAACTTA (2) 2.3 0.0023 P8 GC+1d culture GTGGCTAACA (10) 8 0.008 P8 GC+1d culture GGTGTTCTGA (3) 2.3 0.0023 P8 GC+1d culture TATTTATATT (4) 2.3 0.0023 P8 GC+1d culture TTTCAAGCTT (3) 2.3 0.0023 P8 GC+1d culture AAAATATTTA (6) 1.1 0.0011 P8 GC+1d culture AGCTCTGTAA (3) 1.1 0.0011 P8 GC+1d culture AGGTCTGTAT 1.1 0.0011 P8 GC+1d culture GAAACTGGAA (5) 1.1 0.0011 P8 GC+1d culture TGGAAACTTA (2) 1.1 0.0011 P8 GC+SHH+1d culture GTGGCTAACA (10) 11.7 0.0117 P8 GC+SHH+1d culture TATTTATATT (4) 2.3 0.0023 P8 GC+SHH+1d culture AAAATATTTA (6) 1.2 0.0012 P8 GC+SHH+1d culture AGGTCTGTAT 1.2 0.0012 P8 GC+SHH+1d culture TTTCAAGCTT (3) 1.2 0.0012 3T3 fibroblasts GTGGCTAACA (10) 10.5 0.0105 3T3 fibroblasts GGAGCAGGCT (3) 3.5 0.0035 E15 cortex GTGGCTAACA (10) 9.9 0.0099 E15 cortex TGGAAACTTA (2) 9.9 0.0099 E15 cortex GGTGTTCTGA (3) 4.9 0.0049 P1 cortex GTGGCTAACA (10) 9.1 0.0091 P1 cortex TATTTATATT (4) 4.5 0.0045 P1 cortex TGGAAACTTA (2) 4.5 0.0045 Hypothalamus GTGGCTAACA (10) 25.4 0.0254 Hypothalamus GGTGTTCTGA (3) 7.2 0.0072 Hypothalamus AGGTCTGTAT 1.8 0.0018 Hypothalamus CTGGCCAAAA (5) 1.8 0.0018 Hypothalamus GAAACTGGAA (5) 1.8 0.0018 E12.5 retina GTGGCTAACA (10) 15 0.015 E12.5 retina AAAATATTTA (6) 3.8 0.0038 E12.5 retina GGAGCAGGCT (3) 3.8 0.0038 E12.5 retina AGCTCTGTAA (3) 1.9 0.0019 E14.5 retina GTGGCTAACA (10) 14.6 0.0146 E14.5 retina TGGAAACTTA (2) 3.6 0.0036 E14.5 retina AAAATATTTA (6) 1.8 0.0018 E14.5 retina TATTTATATT (4) 1.8 0.0018 E16.5 retina GTGGCTAACA (10) 30.8 0.0308 E16.5 retina AAAATATTTA (6) 1.8 0.0018 E18.5 retina GTGGCTAACA (10) 12.7 0.0127 E18.5 retina AAAATATTTA (6) 1.8 0.0018 E18.5 retina CTGGCCAAAA (5) 1.8 0.0018 E18.5 retina GAAACTGGAA (5) 1.8 0.0018 P0.5 retina GTGGCTAACA (10) 13.7 0.0137 P0.5 retina AAAATATTTA (6) 3.9 0.0039 P0.5 retina GAAACTGGAA (5) 2 0.002 P0.5 retina TTTCAAGCTT (3) 2 0.002 P2.5 retina GTGGCTAACA (10) 10.6 0.0106 P2.5 retina AAAATATTTA (6) 3.5 0.0035 P2.5 retina CTGGCCAAAA (5) 3.5 0.0035 P2.5 retina TATTTATATT (4) 3.5 0.0035 P2.5 retina TGGAAACTTA (2) 3.5 0.0035 P4.5 retina GTGGCTAACA (10) 17.8 0.0178 P4.5 retina TGGAAACTTA (2) 5.9 0.0059 P4.5 retina TATTTATATT (4) 4 0.004 P4.5 retina AAAATATTTA (6) 2 0.002 P6.5 retina GTGGCTAACA (10) 15 0.015 P6.5 retina AAAATATTTA (6) 1.7 0.0017 P6.5 retina TTTCAAGCTT (3) 1.7 0.0017 P10.5 crx- retina GTGGCTAACA (10) 3.7 0.0037 P10.5 crx- retina TTTCAAGCTT (3) 3.7 0.0037 P10.5 crx+ retina GTGGCTAACA (10) 11.5 0.0115 P10.5 crx+ retina GAAACTGGAA (5) 1.9 0.0019 P10.5 crx+ retina GGAGCAGGCT (3) 1.9 0.0019 P10.5 crx+ retina GGTGTTCTGA (3) 1.9 0.0019 P10.5 crx+ retina TATTTATATT (4) 1.9 0.0019 Adult retinal GTGGCTAACA (10) 11.1 0.0111 Adult retinal TTTCAAGCTT (3) 3.7 0.0037 Adult retinal AAAATATTTA (6) 1.9 0.0019 Adult retinal AGCTCTGTAA (3) 1.9 0.0019 Adult retinal TATTTATATT (4) 1.9 0.0019 ONL GTGGCTAACA (10) 7.7 0.0077 ONL TATTTATATT (4) 1.9 0.0019 ONL TGGAAACTTA (2) 1.9 0.0019