Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.280233	Ube2b	ubiquitin-conjugating enzyme E2B, RAD6 homology (S. cerevisiae)	11		22210
Mm.280233	2610301N02Rik	RIKEN cDNA 2610301N02 gene	11		67159
Mm.280233	5430406J06Rik	RIKEN cDNA 5430406J06 gene	11		73848
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 125 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TGGTTGCTGG (369) 68.5 0.0685 P8 Cb GC CCCTTCTTCT (13) 63.6 0.0636 P8 Cb GC ACAGAATATA (5) 6.5 0.0065 P8 Cb GC AAAACTCCAC (7) 3.3 0.0033 P8 Cb GC CTGGCTGACT (7) 1.6 0.0016 P8 Cb GC GCTAATACTG (4) 1.6 0.0016 P8 Cb GC TAAACTGTAC (3) 1.6 0.0016 Cb medulloblastoma TGGTTGCTGG (369) 113.3 0.1133 Cb medulloblastoma CCCTTCTTCT (13) 80.9 0.0809 Cb medulloblastoma ACAGAATATA (5) 4.6 0.0046 Cb medulloblastoma GTGTGAACTA (4) 2.3 0.0023 P8 GC+1d culture TGGTTGCTGG (369) 57.1 0.0571 P8 GC+1d culture CCCTTCTTCT (13) 12.6 0.0126 P8 GC+1d culture ACAGAATATA (5) 8 0.008 P8 GC+1d culture AAAACTCCAC (7) 2.3 0.0023 P8 GC+1d culture TAAACTGTAC (3) 2.3 0.0023 P8 GC+1d culture CAATAAAAAG (6) 1.1 0.0011 P8 GC+1d culture GTGTGAACTA (4) 1.1 0.0011 P8 GC+1d culture TAATTTCTGA (5) 1.1 0.0011 P8 GC+SHH+1d culture TGGTTGCTGG (369) 89 0.089 P8 GC+SHH+1d culture CCCTTCTTCT (13) 12.9 0.0129 P8 GC+SHH+1d culture TACTGTTTCT (4) 5.9 0.0059 P8 GC+SHH+1d culture ACAGAATATA (5) 4.7 0.0047 P8 GC+SHH+1d culture AAAACTCCAC (7) 1.2 0.0012 P8 GC+SHH+1d culture ATAACAAATC (4) 1.2 0.0012 P8 GC+SHH+1d culture CAATAAAAAG (6) 1.2 0.0012 P8 GC+SHH+1d culture CAGTGGAATG (3) 1.2 0.0012 P8 GC+SHH+1d culture GTGTGAACTA (4) 1.2 0.0012 3T3 fibroblasts TGGTTGCTGG (369) 220.8 0.2208 3T3 fibroblasts TGAGCAGCAG (4) 17.5 0.0175 3T3 fibroblasts CAGTGGAATG (3) 3.5 0.0035 E15 cortex TGGTTGCTGG (369) 277.1 0.2771 E15 cortex CCCTTCTTCT (13) 158.3 0.1583 E15 cortex ACAGAATATA (5) 4.9 0.0049 E15 cortex TGAGCAGCAG (4) 4.9 0.0049 P1 cortex TGGTTGCTGG (369) 86.4 0.0864 P1 cortex ACAGAATATA (5) 4.5 0.0045 P1 cortex CCCTTCTTCT (13) 4.5 0.0045 P1 cortex GCTAATACTG (4) 4.5 0.0045 P1 cortex TAAACTGTAC (3) 4.5 0.0045 P1 cortex TACTGTTTCT (4) 4.5 0.0045 Hypothalamus TGGTTGCTGG (369) 349.6 0.3496 Hypothalamus CCCTTCTTCT (13) 21.7 0.0217 Hypothalamus ACAGAATATA (5) 3.6 0.0036 Hypothalamus TAAACTGTAC (3) 3.6 0.0036 Hypothalamus CAATAAAAAG (6) 1.8 0.0018 Hypothalamus GTGTGAACTA (4) 1.8 0.0018 E12.5 retina TGGTTGCTGG (369) 157.7 0.1577 E12.5 retina CCCTTCTTCT (13) 50.7 0.0507 E12.5 retina ACAGAATATA (5) 7.5 0.0075 E12.5 retina CAGTGGAATG (3) 3.8 0.0038 E14.5 retina TGGTTGCTGG (369) 936.5 0.9365 E14.5 retina CCCTTCTTCT (13) 43.7 0.0437 E14.5 retina TAAACTGTAC (3) 3.6 0.0036 E14.5 retina GCTAATACTG (4) 1.8 0.0018 E14.5 retina GTGTGAACTA (4) 1.8 0.0018 E14.5 retina TACTGTTTCT (4) 1.8 0.0018 E16.5 retina TGGTTGCTGG (369) 767.9 0.7679 E16.5 retina CCCTTCTTCT (13) 18.1 0.0181 E16.5 retina ACAGAATATA (5) 10.9 0.0109 E16.5 retina GTGTGAACTA (4) 10.9 0.0109 E16.5 retina TAAACTGTAC (3) 3.6 0.0036 E16.5 retina ATAACAAATC (4) 1.8 0.0018 E16.5 retina CAATAAAAAG (6) 1.8 0.0018 E16.5 retina TACTGTTTCT (4) 1.8 0.0018 E18.5 retina TGGTTGCTGG (369) 252.8 0.2528 E18.5 retina ACAGAATATA (5) 7.3 0.0073 E18.5 retina CAATAAAAAG (6) 5.5 0.0055 E18.5 retina CCCTTCTTCT (13) 5.5 0.0055 E18.5 retina GTGTGAACTA (4) 3.6 0.0036 E18.5 retina AAAACTCCAC (7) 1.8 0.0018 P0.5 retina TGGTTGCTGG (369) 190.4 0.1904 P0.5 retina CCCTTCTTCT (13) 11.8 0.0118 P0.5 retina ACAGAATATA (5) 7.9 0.0079 P0.5 retina TAAACTGTAC (3) 2 0.002 P0.5 retina TACTGTTTCT (4) 2 0.002 P2.5 retina TGGTTGCTGG (369) 165.4 0.1654 P2.5 retina CCCTTCTTCT (13) 15.8 0.0158 P2.5 retina ACAGAATATA (5) 5.3 0.0053 P2.5 retina CAATAAAAAG (6) 3.5 0.0035 P2.5 retina TGAGCAGCAG (4) 3.5 0.0035 P2.5 retina ATAACAAATC (4) 1.8 0.0018 P2.5 retina CTGGCTGACT (7) 1.8 0.0018 P2.5 retina GTGTGAACTA (4) 1.8 0.0018 P4.5 retina TGGTTGCTGG (369) 150.6 0.1506 P4.5 retina CCCTTCTTCT (13) 11.9 0.0119 P4.5 retina ACAGAATATA (5) 9.9 0.0099 P4.5 retina GTGTGAACTA (4) 4 0.004 P4.5 retina ATAACAAATC (4) 2 0.002 P4.5 retina TAAACTGTAC (3) 2 0.002 P4.5 retina TACTGTTTCT (4) 2 0.002 P6.5 retina TGGTTGCTGG (369) 156.7 0.1567 P6.5 retina ACAGAATATA (5) 15 0.015 P6.5 retina AAAACTCCAC (7) 3.3 0.0033 P6.5 retina CCCTTCTTCT (13) 3.3 0.0033 P6.5 retina CAATAAAAAG (6) 1.7 0.0017 P6.5 retina GTGTGAACTA (4) 1.7 0.0017 P6.5 retina TAAACTGTAC (3) 1.7 0.0017 P6.5 retina TAATTTCTGA (5) 1.7 0.0017 P10.5 crx- retina TGGTTGCTGG (369) 280.5 0.2805 P10.5 crx- retina ACAGAATATA (5) 5.6 0.0056 P10.5 crx- retina GTGTGAACTA (4) 3.7 0.0037 P10.5 crx- retina TAAACTGTAC (3) 3.7 0.0037 P10.5 crx- retina AAAACTCCAC (7) 1.9 0.0019 P10.5 crx- retina CAGTGGAATG (3) 1.9 0.0019 P10.5 crx+ retina TGGTTGCTGG (369) 101.9 0.1019 P10.5 crx+ retina CCCTTCTTCT (13) 19.2 0.0192 P10.5 crx+ retina ACAGAATATA (5) 5.8 0.0058 P10.5 crx+ retina TAAACTGTAC (3) 3.8 0.0038 P10.5 crx+ retina AAAACTCCAC (7) 1.9 0.0019 P10.5 crx+ retina CTGGCTGACT (7) 1.9 0.0019 P10.5 crx+ retina GCTAATACTG (4) 1.9 0.0019 P10.5 crx+ retina GTGTGAACTA (4) 1.9 0.0019 P10.5 crx+ retina TACTGTTTCT (4) 1.9 0.0019 P10.5 crx+ retina TGAGCAGCAG (4) 1.9 0.0019 Adult retinal TGGTTGCTGG (369) 214.8 0.2148 Adult retinal CCCTTCTTCT (13) 5.6 0.0056 Adult retinal ACAGAATATA (5) 1.9 0.0019 Adult retinal CAGTGGAATG (3) 1.9 0.0019 Adult retinal TACTGTTTCT (4) 1.9 0.0019 Adult retinal TGAGCAGCAG (4) 1.9 0.0019 ONL TGGTTGCTGG (369) 398.4 0.3984 ONL ACAGAATATA (5) 3.8 0.0038 ONL CTGGCTGACT (7) 1.9 0.0019 ONL TAATTTCTGA (5) 1.9 0.0019