Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.280484	Sbds	Shwachman-Bodian-Diamond syndrome homolog (human)	5		66711
Gene Ontology	molecular_function unknown
Human Homolog	SBDS[Shwachman-Bodian-Diamond syndrome]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 61 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GAGAGAAGAG (2) 8.2 0.0082 P8 Cb GC TTTTTTTTTT (433) 4.9 0.0049 P8 Cb GC CTACCAAAAC 3.3 0.0033 Cb medulloblastoma GAGAGAAGAG (2) 9.2 0.0092 Cb medulloblastoma CGATTGCGCT 2.3 0.0023 Cb medulloblastoma CTACCAAAAC 2.3 0.0023 Cb medulloblastoma TTTTTTTTTT (433) 2.3 0.0023 P8 GC+1d culture GAGAGAAGAG (2) 18.3 0.0183 P8 GC+1d culture TTTTTTTTTT (433) 13.7 0.0137 P8 GC+1d culture CTACCAAAAC 1.1 0.0011 P8 GC+SHH+1d culture GAGAGAAGAG (2) 9.4 0.0094 P8 GC+SHH+1d culture TTTTTTTTTT (433) 5.9 0.0059 P8 GC+SHH+1d culture CTACCAAAAC 3.5 0.0035 3T3 fibroblasts CGATTGCGCT 7 0.007 E15 cortex GAGAGAAGAG (2) 14.8 0.0148 E15 cortex CTACCAAAAC 4.9 0.0049 E15 cortex TTTTTTTTTT (433) 4.9 0.0049 P1 cortex GAGAGAAGAG (2) 86.4 0.0864 P1 cortex TTTTTTTTTT (433) 4.5 0.0045 Hypothalamus GAGAGAAGAG (2) 25.4 0.0254 Hypothalamus TTTTTTTTTT (433) 7.2 0.0072 Hypothalamus TTGGTTGAAA 5.4 0.0054 Hypothalamus CTACCAAAAC 3.6 0.0036 Hypothalamus GAAGACCTCC (2) 1.8 0.0018 E12.5 retina GAGAGAAGAG (2) 13.1 0.0131 E12.5 retina TTTTTTTTTT (433) 7.5 0.0075 E12.5 retina CTACCAAAAC 5.6 0.0056 E14.5 retina TTTTTTTTTT (433) 23.7 0.0237 E14.5 retina GAGAGAAGAG (2) 21.9 0.0219 E14.5 retina CTACCAAAAC 3.6 0.0036 E14.5 retina CGATTGCGCT 1.8 0.0018 E16.5 retina GAGAGAAGAG (2) 25.4 0.0254 E16.5 retina CTACCAAAAC 5.4 0.0054 E16.5 retina TTTTTTTTTT (433) 5.4 0.0054 E16.5 retina TTGGTTGAAA 1.8 0.0018 E18.5 retina GAGAGAAGAG (2) 18.2 0.0182 E18.5 retina TTTTTTTTTT (433) 10.9 0.0109 E18.5 retina GAAGACCTCC (2) 3.6 0.0036 P0.5 retina GAGAGAAGAG (2) 9.8 0.0098 P0.5 retina TTTTTTTTTT (433) 9.8 0.0098 P0.5 retina CGATTGCGCT 2 0.002 P0.5 retina CTACCAAAAC 2 0.002 P2.5 retina GAGAGAAGAG (2) 24.6 0.0246 P2.5 retina TTTTTTTTTT (433) 7 0.007 P2.5 retina GAAGACCTCC (2) 1.8 0.0018 P4.5 retina GAGAGAAGAG (2) 15.9 0.0159 P4.5 retina TTTTTTTTTT (433) 9.9 0.0099 P4.5 retina GAAGACCTCC (2) 4 0.004 P6.5 retina GAGAGAAGAG (2) 13.3 0.0133 P6.5 retina TTTTTTTTTT (433) 8.3 0.0083 P6.5 retina CTACCAAAAC 1.7 0.0017 P10.5 crx- retina GAGAGAAGAG (2) 7.4 0.0074 P10.5 crx- retina CTACCAAAAC 1.9 0.0019 P10.5 crx+ retina CTACCAAAAC 5.8 0.0058 P10.5 crx+ retina TTTTTTTTTT (433) 3.8 0.0038 P10.5 crx+ retina GAGAGAAGAG (2) 1.9 0.0019 Adult retinal GAGAGAAGAG (2) 9.3 0.0093 Adult retinal TTTTTTTTTT (433) 7.4 0.0074 Adult retinal CGATTGCGCT 1.9 0.0019 Adult retinal CTACCAAAAC 1.9 0.0019 ONL TTTTTTTTTT (433) 3.8 0.0038