Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.280559
BC022145
cDNA sequence BC022145
11
217203
Human Homolog
MGC20235[hypothetical protein MGC20235]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 56 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
GCCTCTGCAT (
29
)
8.2
0.0082
P8 Cb GC
GCCAGCCAGG (
10
)
3.3
0.0033
P8 Cb GC
TGAATAATGA
(
4
)
1.6
0.0016
Cb medulloblastoma
GCCTCTGCAT (
29
)
6.9
0.0069
Cb medulloblastoma
GCCAGCCAGG (
10
)
2.3
0.0023
P8 GC+1d culture
GCCTCTGCAT (
29
)
20.5
0.0205
P8 GC+1d culture
GCCAGCCAGG (
10
)
5.7
0.0057
P8 GC+1d culture
AAGAAAGGAG (
4
)
1.1
0.0011
P8 GC+SHH+1d culture
GCCTCTGCAT (
29
)
9.4
0.0094
P8 GC+SHH+1d culture
GCCAGCCAGG (
10
)
3.5
0.0035
P8 GC+SHH+1d culture
AAGAAAGGAG (
4
)
1.2
0.0012
3T3 fibroblasts
AAGAAAGGAG (
4
)
10.5
0.0105
3T3 fibroblasts
GCCTCTGCAT (
29
)
7
0.007
3T3 fibroblasts
GCCAGCCAGG (
10
)
3.5
0.0035
E15 cortex
GCCTCTGCAT (
29
)
39.6
0.0396
E15 cortex
GCCAGCCAGG (
10
)
19.8
0.0198
P1 cortex
GCCTCTGCAT (
29
)
18.2
0.0182
P1 cortex
TGAATAATGA
(
4
)
4.5
0.0045
Hypothalamus
GCCTCTGCAT (
29
)
10.9
0.0109
Hypothalamus
GCCAGCCAGG (
10
)
5.4
0.0054
Hypothalamus
TGAATAATGA
(
4
)
1.8
0.0018
E12.5 retina
GCCTCTGCAT (
29
)
11.3
0.0113
E12.5 retina
GCCAGCCAGG (
10
)
3.8
0.0038
E12.5 retina
TGAATAATGA
(
4
)
3.8
0.0038
E14.5 retina
GCCTCTGCAT (
29
)
14.6
0.0146
E14.5 retina
GCCAGCCAGG (
10
)
1.8
0.0018
E14.5 retina
TGAATAATGA
(
4
)
1.8
0.0018
E16.5 retina
GCCTCTGCAT (
29
)
16.3
0.0163
E16.5 retina
GCCAGCCAGG (
10
)
7.2
0.0072
E16.5 retina
AAGAAAGGAG (
4
)
3.6
0.0036
E16.5 retina
TGAATAATGA
(
4
)
1.8
0.0018
E18.5 retina
GCCTCTGCAT (
29
)
9.1
0.0091
E18.5 retina
GCCAGCCAGG (
10
)
5.5
0.0055
P0.5 retina
GCCTCTGCAT (
29
)
23.6
0.0236
P0.5 retina
GCCAGCCAGG (
10
)
11.8
0.0118
P0.5 retina
TGAATAATGA
(
4
)
3.9
0.0039
P0.5 retina
AAGAAAGGAG (
4
)
2
0.002
P2.5 retina
GCCTCTGCAT (
29
)
31.7
0.0317
P2.5 retina
GCCAGCCAGG (
10
)
12.3
0.0123
P4.5 retina
GCCTCTGCAT (
29
)
19.8
0.0198
P4.5 retina
GCCAGCCAGG (
10
)
5.9
0.0059
P4.5 retina
TGAATAATGA
(
4
)
5.9
0.0059
P6.5 retina
GCCTCTGCAT (
29
)
21.7
0.0217
P6.5 retina
GCCAGCCAGG (
10
)
6.7
0.0067
P6.5 retina
TGAATAATGA
(
4
)
1.7
0.0017
P10.5 crx- retina
GCCTCTGCAT (
29
)
27.9
0.0279
P10.5 crx- retina
GCCAGCCAGG (
10
)
1.9
0.0019
P10.5 crx- retina
TGAATAATGA
(
4
)
1.9
0.0019
P10.5 crx+ retina
GCCTCTGCAT (
29
)
32.7
0.0327
P10.5 crx+ retina
GCCAGCCAGG (
10
)
1.9
0.0019
P10.5 crx+ retina
TGAATAATGA
(
4
)
1.9
0.0019
Adult retinal
GCCTCTGCAT (
29
)
33.3
0.0333
Adult retinal
GCCAGCCAGG (
10
)
3.7
0.0037
ONL
GCCTCTGCAT (
29
)
17.2
0.0172
ONL
TGAATAATGA
(
4
)
3.8
0.0038
ONL
AAGAAAGGAG (
4
)
1.9
0.0019
