Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.280913	1190028F09	hypothetical protein 1190028F09	7		330481
Mm.280913	Ercc1	excision repair cross-complementing rodent repair deficiency, complementation group 1	7	7 4.0 cM	13870
Gene Ontology	damaged DNA binding | DNA binding | DNA repair | endonuclease activity | hydrolase activity | intracellular | nuclease activity | nucleotide excision repair complex | nucleotide-excision repair | nucleus
Human Homolog	ERCC1[excision repair cross-complementing rodent repair deficiency, complementation group 1 (includes overlapping antisense sequence)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 53 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CCCAGGCAAA (4) 1.6 0.0016 Cb medulloblastoma CCCAGGCAAA (4) 4.6 0.0046 Cb medulloblastoma CCCAGAAAAA (4) 2.3 0.0023 P8 GC+1d culture CCCAGGCAAA (4) 3.4 0.0034 P8 GC+1d culture AGGCTGGCCC (7) 1.1 0.0011 P8 GC+SHH+1d culture CCCAGGCAAA (4) 10.5 0.0105 P8 GC+SHH+1d culture CCCAAAAAAA (19) 3.5 0.0035 3T3 fibroblasts AGGCTGGCCC (7) 3.5 0.0035 3T3 fibroblasts CCCAGGCAAA (4) 3.5 0.0035 3T3 fibroblasts GAAAATTCTT (3) 3.5 0.0035 E15 cortex CCCAAAAAAA (19) 4.9 0.0049 P1 cortex CCCAGGCAAA (4) 4.5 0.0045 Hypothalamus CCCAGAAAAA (4) 1.8 0.0018 Hypothalamus CCCAGGAAAA (4) 1.8 0.0018 Hypothalamus CCCAGGCAAA (4) 1.8 0.0018 Hypothalamus GAAAATTCTT (3) 1.8 0.0018 E12.5 retina CCCAGGCAAA (4) 3.8 0.0038 E12.5 retina AGGCTGGCCC (7) 1.9 0.0019 E14.5 retina CCCAGGCAAA (4) 5.5 0.0055 E14.5 retina AGGCTGGCCC (7) 1.8 0.0018 E14.5 retina CAGGTCAAGC (4) 1.8 0.0018 E16.5 retina CCCAGGCAAA (4) 3.6 0.0036 E16.5 retina CCCAAAAAAA (19) 1.8 0.0018 E16.5 retina CCCAGAAAAA (4) 1.8 0.0018 E16.5 retina CCCAGGAAAA (4) 1.8 0.0018 E16.5 retina GAAAATTCTT (3) 1.8 0.0018 E18.5 retina CAGGTCAAGC (4) 5.5 0.0055 E18.5 retina CCCAGGCAAA (4) 5.5 0.0055 E18.5 retina CCCAAAAAAA (19) 3.6 0.0036 E18.5 retina CCCAGGAAAA (4) 1.8 0.0018 P0.5 retina CAGGTCAAGC (4) 2 0.002 P0.5 retina CCCAAAAAAA (19) 2 0.002 P2.5 retina CCCAGGCAAA (4) 5.3 0.0053 P2.5 retina CAGGTCAAGC (4) 3.5 0.0035 P2.5 retina AGGCTGGCCC (7) 1.8 0.0018 P2.5 retina CCCAAAAAAA (19) 1.8 0.0018 P2.5 retina CCCAGGAAAA (4) 1.8 0.0018 P4.5 retina CCCAGGCAAA (4) 5.9 0.0059 P4.5 retina CCCAGAAAAA (4) 4 0.004 P4.5 retina CCCAAAAAAA (19) 2 0.002 P6.5 retina CCCAGGCAAA (4) 13.3 0.0133 P6.5 retina CCCAAAAAAA (19) 3.3 0.0033 P6.5 retina CCCAGGAAAA (4) 3.3 0.0033 P10.5 crx- retina CCCAGGCAAA (4) 1.9 0.0019 P10.5 crx+ retina CCCAGGCAAA (4) 7.7 0.0077 P10.5 crx+ retina CCCAGGAAAA (4) 1.9 0.0019 P10.5 crx+ retina GAAAATTCTT (3) 1.9 0.0019 Adult retinal CCCAGGCAAA (4) 7.4 0.0074 Adult retinal AGGCTGGCCC (7) 3.7 0.0037 Adult retinal CCCAAAAAAA (19) 1.9 0.0019 Adult retinal CCCAGAAAAA (4) 1.9 0.0019 ONL CCCAAAAAAA (19) 1.9 0.0019 ONL CCCAGGCAAA (4) 1.9 0.0019