Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.281379	Casp6	caspase 6	3		12368
Gene Ontology	apoptosis | caspase activity | cysteine-type peptidase activity | hydrolase activity | induction of apoptosis | induction of apoptosis | proteolysis and peptidolysis | regulation of apoptosis
Human Homolog	CASP6[caspase 6, apoptosis-related cysteine protease]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 66 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TATTCATTTA (2) 1.6 0.0016 Cb medulloblastoma GAAACCAGGA (8) 4.6 0.0046 Cb medulloblastoma GTGGATCACA (7) 2.3 0.0023 P8 GC+1d culture GAAACCAGGA (8) 4.6 0.0046 P8 GC+1d culture GTGGATCACA (7) 2.3 0.0023 P8 GC+1d culture TTGGACGTGG (2) 2.3 0.0023 P8 GC+1d culture TAACTGCTTC (2) 1.1 0.0011 P8 GC+SHH+1d culture GTGGATCACA (7) 3.5 0.0035 P8 GC+SHH+1d culture TATTCATTTA (2) 2.3 0.0023 P8 GC+SHH+1d culture GGGAAGGGAA (14) 1.2 0.0012 3T3 fibroblasts GAAACCAGGA (8) 3.5 0.0035 3T3 fibroblasts TTGGACGTGG (2) 3.5 0.0035 E15 cortex GAAACCAGGA (8) 4.9 0.0049 E15 cortex GTGGATCACA (7) 4.9 0.0049 P1 cortex GAAACCAGGA (8) 4.5 0.0045 P1 cortex GAACTGTTCC (2) 4.5 0.0045 P1 cortex TATTCATTTA (2) 4.5 0.0045 Hypothalamus GAAACCAGGA (8) 3.6 0.0036 Hypothalamus GTGGATCACA (7) 1.8 0.0018 Hypothalamus TAACTGCTTC (2) 1.8 0.0018 E12.5 retina GAACTGTTCC (2) 3.8 0.0038 E12.5 retina GTGGATCACA (7) 3.8 0.0038 E12.5 retina GAAACCAGGA (8) 1.9 0.0019 E12.5 retina GGGAAGGGAA (14) 1.9 0.0019 E12.5 retina GGGAAGGGCA (5) 1.9 0.0019 E12.5 retina TAACTGCTTC (2) 1.9 0.0019 E12.5 retina TTGGACGTGG (2) 1.9 0.0019 E14.5 retina GTGGATCACA (7) 3.6 0.0036 E14.5 retina GAAACCAGGA (8) 1.8 0.0018 E16.5 retina GTGGATCACA (7) 5.4 0.0054 E16.5 retina TTGGACGTGG (2) 5.4 0.0054 E16.5 retina GAACTGTTCC (2) 3.6 0.0036 E16.5 retina TATTCATTTA (2) 3.6 0.0036 E16.5 retina GAAACCAGGA (8) 1.8 0.0018 E18.5 retina GGGAAGGGCA (5) 3.6 0.0036 E18.5 retina GAAACCAGGA (8) 1.8 0.0018 P0.5 retina GTGGATCACA (7) 2 0.002 P0.5 retina TTGGACGTGG (2) 2 0.002 P2.5 retina GAAACCAGGA (8) 5.3 0.0053 P2.5 retina TATTCATTTA (2) 3.5 0.0035 P2.5 retina GGGAAGGGAA (14) 1.8 0.0018 P2.5 retina TTGGACGTGG (2) 1.8 0.0018 P4.5 retina GTGGATCACA (7) 5.9 0.0059 P4.5 retina TTGGACGTGG (2) 5.9 0.0059 P4.5 retina GAAACCAGGA (8) 4 0.004 P4.5 retina ACCAAGTCAA (5) 2 0.002 P4.5 retina TATTCATTTA (2) 2 0.002 P6.5 retina GAAACCAGGA (8) 13.3 0.0133 P6.5 retina GGGAAGGGAA (14) 3.3 0.0033 P6.5 retina GTGGATCACA (7) 3.3 0.0033 P6.5 retina TTGGACGTGG (2) 3.3 0.0033 P6.5 retina GAACTGTTCC (2) 1.7 0.0017 P10.5 crx- retina GAAACCAGGA (8) 1.9 0.0019 P10.5 crx- retina GAACTGTTCC (2) 1.9 0.0019 P10.5 crx- retina TATTCATTTA (2) 1.9 0.0019 P10.5 crx- retina TTGGACGTGG (2) 1.9 0.0019 P10.5 crx+ retina GAAACCAGGA (8) 5.8 0.0058 P10.5 crx+ retina ACCAAGTCAA (5) 1.9 0.0019 P10.5 crx+ retina GTGGATCACA (7) 1.9 0.0019 Adult retinal GAAACCAGGA (8) 9.3 0.0093 Adult retinal GAACTGTTCC (2) 3.7 0.0037 Adult retinal GTGGATCACA (7) 3.7 0.0037 Adult retinal GGGAAGGGCA (5) 1.9 0.0019 ONL GAAACCAGGA (8) 15.3 0.0153 ONL GGGAAGGGAA (14) 3.8 0.0038 ONL GTGGATCACA (7) 3.8 0.0038