Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.2815
1110021H02Rik
RIKEN cDNA 1110021H02 gene
1
1 93.0 cM
66155
Human Homolog
Ufc1[Ufm1-conjugating enzyme 1]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 60 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
GAAAAAAAAA (
204
)
45.7
0.0457
P8 Cb GC
TTTTTTTTTT (
433
)
4.9
0.0049
Cb medulloblastoma
GAAAAAAAAA (
204
)
173.4
0.1734
Cb medulloblastoma
TTTTTTTTTT (
433
)
2.3
0.0023
P8 GC+1d culture
GAAAAAAAAA (
204
)
41.1
0.0411
P8 GC+1d culture
TTTTTTTTTT (
433
)
13.7
0.0137
P8 GC+1d culture
GCCCTGGGGC
(
7
)
10.3
0.0103
P8 GC+SHH+1d culture
GAAAAAAAAA (
204
)
77.3
0.0773
P8 GC+SHH+1d culture
TTTTTTTTTT (
433
)
5.9
0.0059
P8 GC+SHH+1d culture
GCCCTGGGGC
(
7
)
1.2
0.0012
3T3 fibroblasts
GCCCTGGGGC
(
7
)
31.5
0.0315
3T3 fibroblasts
AGATGAGCTA
3.5
0.0035
E15 cortex
GAAAAAAAAA (
204
)
54.4
0.0544
E15 cortex
GCCCTGGGGC
(
7
)
4.9
0.0049
E15 cortex
TTTTTTTTTT (
433
)
4.9
0.0049
P1 cortex
GAAAAAAAAA (
204
)
45.5
0.0455
P1 cortex
GCCCTGGGGC
(
7
)
4.5
0.0045
P1 cortex
TTTTTTTTTT (
433
)
4.5
0.0045
Hypothalamus
GAAAAAAAAA (
204
)
67
0.067
Hypothalamus
GCCCTGGGGC
(
7
)
7.2
0.0072
Hypothalamus
TTTTTTTTTT (
433
)
7.2
0.0072
E12.5 retina
GAAAAAAAAA (
204
)
46.9
0.0469
E12.5 retina
TTTTTTTTTT (
433
)
7.5
0.0075
E12.5 retina
AGATGAGCTA
3.8
0.0038
E12.5 retina
GCCCTGGGGC
(
7
)
3.8
0.0038
E14.5 retina
GAAAAAAAAA (
204
)
34.6
0.0346
E14.5 retina
TTTTTTTTTT (
433
)
23.7
0.0237
E16.5 retina
GAAAAAAAAA (
204
)
23.5
0.0235
E16.5 retina
TTTTTTTTTT (
433
)
5.4
0.0054
E16.5 retina
AGATGAGCTA
3.6
0.0036
E16.5 retina
GCCCTGGGGC
(
7
)
1.8
0.0018
E18.5 retina
GAAAAAAAAA (
204
)
65.5
0.0655
E18.5 retina
TTTTTTTTTT (
433
)
10.9
0.0109
P0.5 retina
GAAAAAAAAA (
204
)
35.3
0.0353
P0.5 retina
TTTTTTTTTT (
433
)
9.8
0.0098
P0.5 retina
GCCCTGGGGC
(
7
)
7.9
0.0079
P0.5 retina
AGATGAGCTA
2
0.002
P2.5 retina
GAAAAAAAAA (
204
)
86.2
0.0862
P2.5 retina
TTTTTTTTTT (
433
)
7
0.007
P2.5 retina
AGATGAGCTA
1.8
0.0018
P2.5 retina
GCCCTGGGGC
(
7
)
1.8
0.0018
P4.5 retina
GAAAAAAAAA (
204
)
51.5
0.0515
P4.5 retina
TTTTTTTTTT (
433
)
9.9
0.0099
P4.5 retina
GCCCTGGGGC
(
7
)
2
0.002
P6.5 retina
GAAAAAAAAA (
204
)
40
0.04
P6.5 retina
TTTTTTTTTT (
433
)
8.3
0.0083
P6.5 retina
AGATGAGCTA
1.7
0.0017
P6.5 retina
GCCCTGGGGC
(
7
)
1.7
0.0017
P10.5 crx- retina
GAAAAAAAAA (
204
)
16.7
0.0167
P10.5 crx- retina
GCCCTGGGGC
(
7
)
5.6
0.0056
P10.5 crx+ retina
GAAAAAAAAA (
204
)
42.3
0.0423
P10.5 crx+ retina
AGATGAGCTA
3.8
0.0038
P10.5 crx+ retina
GCCCTGGGGC
(
7
)
3.8
0.0038
P10.5 crx+ retina
TTTTTTTTTT (
433
)
3.8
0.0038
Adult retinal
GAAAAAAAAA (
204
)
16.7
0.0167
Adult retinal
GCCCTGGGGC
(
7
)
9.3
0.0093
Adult retinal
TTTTTTTTTT (
433
)
7.4
0.0074
ONL
GAAAAAAAAA (
204
)
24.9
0.0249
ONL
TTTTTTTTTT (
433
)
3.8
0.0038
ONL
GCCCTGGGGC
(
7
)
1.9
0.0019
