Mouse Retina SAGE Library
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Gene: 
Accession: 
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag: 
Cytoband (Mm): 
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene: 
Cytoband (Hs): 
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.28160
C79375
EST C79375
107644
Mm.28160
R75405
expressed sequence R75405
13
97912
Mm.28160
Snx27
sorting nexin family member 27
3
76742
Human Homolog
SNX27[sorting nexin family member 27]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 63 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
TCAGACAGTA
(
3
)
4.9
0.0049
P8 Cb GC
TGGTGATATT (
5
)
3.3
0.0033
P8 Cb GC
CCCCGCCTGG (
5
)
1.6
0.0016
P8 Cb GC
GGAGACGAAA (
4
)
1.6
0.0016
P8 Cb GC
TTTATTAAAA (
6
)
1.6
0.0016
Cb medulloblastoma
TCAGACAGTA
(
3
)
2.3
0.0023
Cb medulloblastoma
TGGTGATATT (
5
)
2.3
0.0023
P8 GC+1d culture
TGGTGATATT (
5
)
4.6
0.0046
P8 GC+1d culture
TTTATTAAAA (
6
)
4.6
0.0046
P8 GC+1d culture
TCAGACAGTA
(
3
)
2.3
0.0023
P8 GC+1d culture
ACCTCTCTCT
(
6
)
1.1
0.0011
P8 GC+SHH+1d culture
ACCTCTCTCT
(
6
)
2.3
0.0023
P8 GC+SHH+1d culture
TGGTGATATT (
5
)
2.3
0.0023
P8 GC+SHH+1d culture
TTTATTAAAA (
6
)
2.3
0.0023
P8 GC+SHH+1d culture
CTGTTCCTGA
(
3
)
1.2
0.0012
P8 GC+SHH+1d culture
GGAGACGAAA (
4
)
1.2
0.0012
P8 GC+SHH+1d culture
TCAGACAGTA
(
3
)
1.2
0.0012
E15 cortex
CCCCGCCTGG (
5
)
4.9
0.0049
E15 cortex
CTGTTCCTGA
(
3
)
4.9
0.0049
P1 cortex
TCAGACAGTA
(
3
)
4.5
0.0045
Hypothalamus
ACCTCTCTCT
(
6
)
3.6
0.0036
Hypothalamus
TTTATTAAAA (
6
)
3.6
0.0036
Hypothalamus
GCTGGGAGGC
(
4
)
1.8
0.0018
Hypothalamus
TCAGACAGTA
(
3
)
1.8
0.0018
E12.5 retina
TCAGACAGTA
(
3
)
5.6
0.0056
E12.5 retina
TGGTGATATT (
5
)
3.8
0.0038
E12.5 retina
CCCCGCCTGG (
5
)
1.9
0.0019
E12.5 retina
CTGTTCCTGA
(
3
)
1.9
0.0019
E12.5 retina
GGAGACGAAA (
4
)
1.9
0.0019
E14.5 retina
TTTATTAAAA (
6
)
7.3
0.0073
E14.5 retina
CTGTTCCTGA
(
3
)
1.8
0.0018
E14.5 retina
TGGTGATATT (
5
)
1.8
0.0018
E16.5 retina
TGGTGATATT (
5
)
3.6
0.0036
E16.5 retina
TTTATTAAAA (
6
)
1.8
0.0018
E18.5 retina
TCAGACAGTA
(
3
)
3.6
0.0036
E18.5 retina
ACCTCTCTCT
(
6
)
1.8
0.0018
E18.5 retina
CACACTTATA
(
3
)
1.8
0.0018
E18.5 retina
CTGTTCCTGA
(
3
)
1.8
0.0018
E18.5 retina
TGGTGATATT (
5
)
1.8
0.0018
P0.5 retina
CACACTTATA
(
3
)
3.9
0.0039
P0.5 retina
TGGTGATATT (
5
)
2
0.002
P0.5 retina
TTTATTAAAA (
6
)
2
0.002
P2.5 retina
TGGTGATATT (
5
)
7
0.007
P2.5 retina
CTGTTCCTGA
(
3
)
1.8
0.0018
P4.5 retina
CACACTTATA
(
3
)
4
0.004
P4.5 retina
ACCTCTCTCT
(
6
)
2
0.002
P4.5 retina
TTTATTAAAA (
6
)
2
0.002
P6.5 retina
TTTATTAAAA (
6
)
8.3
0.0083
P6.5 retina
TCAGACAGTA
(
3
)
3.3
0.0033
P10.5 crx- retina
CTGTTCCTGA
(
3
)
1.9
0.0019
P10.5 crx- retina
TCAGACAGTA
(
3
)
1.9
0.0019
P10.5 crx- retina
TGGTGATATT (
5
)
1.9
0.0019
P10.5 crx- retina
TTTATTAAAA (
6
)
1.9
0.0019
P10.5 crx+ retina
TTTATTAAAA (
6
)
7.7
0.0077
P10.5 crx+ retina
CACACTTATA
(
3
)
3.8
0.0038
P10.5 crx+ retina
GGAGACGAAA (
4
)
1.9
0.0019
P10.5 crx+ retina
TCAGACAGTA
(
3
)
1.9
0.0019
P10.5 crx+ retina
TGGTGATATT (
5
)
1.9
0.0019
Adult retinal
TGGTGATATT (
5
)
7.4
0.0074
Adult retinal
CACACTTATA
(
3
)
1.9
0.0019
Adult retinal
GCTGGGAGGC
(
4
)
1.9
0.0019
ONL
GCTGGGAGGC
(
4
)
1.9
0.0019
ONL
TTTATTAAAA (
6
)
1.9
0.0019