Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.281900	Usp39	ubiquitin specific protease 39	6	6 31.5 cM	28035
Gene Ontology	cysteine-type endopeptidase activity | peptidase activity | ubiquitin thiolesterase activity | ubiquitin-dependent protein catabolism
Human Homolog	USP39[ubiquitin specific protease 39]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 40 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AAGGAGCTGT (5) 6.5 0.0065 P8 Cb GC AAGGAGCCTG (2) 4.9 0.0049 P8 Cb GC TTCTTGTTGG (2) 1.6 0.0016 Cb medulloblastoma TTCTTGTTGG (2) 2.3 0.0023 P8 GC+1d culture AAGGAGCTGT (5) 4.6 0.0046 P8 GC+1d culture TTCTTGTTGG (2) 3.4 0.0034 P8 GC+1d culture AAGGAGCCTG (2) 1.1 0.0011 P8 GC+SHH+1d culture AAGGAGCTGT (5) 7 0.007 P8 GC+SHH+1d culture AAGGAGCCTG (2) 1.2 0.0012 3T3 fibroblasts AAGGAGCCTG (2) 7 0.007 3T3 fibroblasts TTCTTGTTGG (2) 3.5 0.0035 P1 cortex AAGGAGCCTG (2) 4.5 0.0045 P1 cortex TTCTTGTTGG (2) 4.5 0.0045 Hypothalamus AAGGAGCTGT (5) 1.8 0.0018 E12.5 retina AAGGAGCCTG (2) 1.9 0.0019 E12.5 retina TTCTTGTTGG (2) 1.9 0.0019 E14.5 retina AAGGAGCTGT (5) 1.8 0.0018 E14.5 retina TTCTTGTTGG (2) 1.8 0.0018 E16.5 retina AAGGAGCCTG (2) 1.8 0.0018 E16.5 retina TTCTTGTTGG (2) 1.8 0.0018 E18.5 retina AAGGAGCTGT (5) 7.3 0.0073 P0.5 retina AAGGAGCCTG (2) 3.9 0.0039 P0.5 retina AAGGAGCTGT (5) 2 0.002 P2.5 retina AAGGAGCTGT (5) 5.3 0.0053 P2.5 retina TTCTTGTTGG (2) 1.8 0.0018 P4.5 retina AAGGAGCTGT (5) 5.9 0.0059 P4.5 retina AAGGAGCCTG (2) 2 0.002 P4.5 retina GTGATGCAGG (2) 2 0.002 P6.5 retina AAGGAGCCTG (2) 1.7 0.0017 P6.5 retina TTCTTGTTGG (2) 1.7 0.0017 P10.5 crx- retina TTCTTGTTGG (2) 7.4 0.0074 P10.5 crx- retina AAGGAGCCTG (2) 3.7 0.0037 P10.5 crx- retina AAGGAGCTGT (5) 1.9 0.0019 P10.5 crx+ retina GTGATGCAGG (2) 3.8 0.0038 P10.5 crx+ retina AAGGAGCCTG (2) 1.9 0.0019 P10.5 crx+ retina AAGGAGCTGT (5) 1.9 0.0019 Adult retinal TTCTTGTTGG (2) 3.7 0.0037 Adult retinal AAGGAGCTGT (5) 1.9 0.0019 ONL AAGGAGCTGT (5) 5.7 0.0057 ONL AAGGAGCCTG (2) 1.9 0.0019