Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.282053	Rpl7	ribosomal protein L7	1		19989
Gene Ontology	cytosolic ribosome (sensu Eukarya) | intracellular | large ribosomal subunit | protein biosynthesis | ribosome | ribosome biogenesis | RNA binding | structural constituent of ribosome | transcription regulator activity
Human Homolog	RPL7[ribosomal protein L7]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 209 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AAAAAAAAAA (658) 203.9 0.2039 P8 Cb GC AGATCTATAC (2) 29.4 0.0294 P8 Cb GC CAAATGAAGT (3) 8.2 0.0082 P8 Cb GC GTTCCAGCCG (2) 8.2 0.0082 P8 Cb GC TGGGTGCTGG (64) 8.2 0.0082 P8 Cb GC GAGGATCTAC (4) 6.5 0.0065 P8 Cb GC TATTTTGTAT (3) 3.3 0.0033 P8 Cb GC AAAATCTTTA (4) 1.6 0.0016 P8 Cb GC GAATTTTTTT (5) 1.6 0.0016 P8 Cb GC GGATCTATAC 1.6 0.0016 P8 Cb GC TTAATTGAAG (3) 1.6 0.0016 Cb medulloblastoma AAAAAAAAAA (658) 797.8 0.7978 Cb medulloblastoma AGATCTATAC (2) 11.6 0.0116 Cb medulloblastoma TGGGTGCTGG (64) 9.2 0.0092 Cb medulloblastoma GAGGATCTAC (4) 6.9 0.0069 Cb medulloblastoma CAAATGAAGT (3) 4.6 0.0046 Cb medulloblastoma GAATTTTTTT (5) 4.6 0.0046 Cb medulloblastoma GTATTTTTGT 4.6 0.0046 Cb medulloblastoma CAAATAAAGC (4) 2.3 0.0023 Cb medulloblastoma GTAGGCTGTT (3) 2.3 0.0023 Cb medulloblastoma GTTCCAGCCG (2) 2.3 0.0023 Cb medulloblastoma TGCTCTGCCT (20) 2.3 0.0023 Cb medulloblastoma TTAATGGAAG (2) 2.3 0.0023 Cb medulloblastoma TTAATTGAAG (3) 2.3 0.0023 P8 GC+1d culture AAAAAAAAAA (658) 204.3 0.2043 P8 GC+1d culture AGATCTATAC (2) 54.8 0.0548 P8 GC+1d culture TGCTCTGCCT (20) 10.3 0.0103 P8 GC+1d culture TGGGTGCTGG (64) 5.7 0.0057 P8 GC+1d culture CAAATGAAGT (3) 4.6 0.0046 P8 GC+1d culture GGGGTACCCC (7) 4.6 0.0046 P8 GC+1d culture GTTCCAGCCG (2) 3.4 0.0034 P8 GC+1d culture GTAGGCTGTT (3) 2.3 0.0023 P8 GC+1d culture CAGATAAAGC (2) 1.1 0.0011 P8 GC+1d culture GCAAAAAAAG (4) 1.1 0.0011 P8 GC+1d culture GGATCTATAC 1.1 0.0011 P8 GC+1d culture GTATTTTTGT 1.1 0.0011 P8 GC+1d culture TATTTTGTAT (3) 1.1 0.0011 P8 GC+SHH+1d culture AAAAAAAAAA (658) 278.7 0.2787 P8 GC+SHH+1d culture AGATCTATAC (2) 29.3 0.0293 P8 GC+SHH+1d culture GTTCCAGCCG (2) 11.7 0.0117 P8 GC+SHH+1d culture TGCTCTGCCT (20) 9.4 0.0094 P8 GC+SHH+1d culture CAAATGAAGT (3) 8.2 0.0082 P8 GC+SHH+1d culture GTAGGCTGTT (3) 4.7 0.0047 P8 GC+SHH+1d culture TGGGTGCTGG (64) 3.5 0.0035 P8 GC+SHH+1d culture AAATCTATAC 1.2 0.0012 P8 GC+SHH+1d culture GAATTTTTTT (5) 1.2 0.0012 P8 GC+SHH+1d culture GGGGTACCCC (7) 1.2 0.0012 P8 GC+SHH+1d culture GTATTTGGAT (2) 1.2 0.0012 P8 GC+SHH+1d culture GTATTTTTGT 1.2 0.0012 P8 GC+SHH+1d culture TTAATTGAAG (3) 1.2 0.0012 3T3 fibroblasts AAAAAAAAAA (658) 28 0.028 3T3 fibroblasts TGGGTGCTGG (64) 17.5 0.0175 3T3 fibroblasts AGATCTATAC (2) 3.5 0.0035 3T3 fibroblasts CAAATGAAGT (3) 3.5 0.0035 3T3 fibroblasts GGGGTACCCC (7) 3.5 0.0035 3T3 fibroblasts GTAGGCTGTT (3) 3.5 0.0035 3T3 fibroblasts GTTCCAGCCG (2) 3.5 0.0035 3T3 fibroblasts TGCTCTGCCT (20) 3.5 0.0035 E15 cortex AAAAAAAAAA (658) 212.8 0.2128 E15 cortex TGGGTGCTGG (64) 14.8 0.0148 E15 cortex AGATCTATAC (2) 4.9 0.0049 E15 cortex CAAATGAAGT (3) 4.9 0.0049 E15 cortex GAATTTTTTT (5) 4.9 0.0049 E15 cortex GAGGATCTAA (4) 4.9 0.0049 E15 cortex GTTCCAGCCG (2) 4.9 0.0049 E15 cortex TGCTCTGCCT (20) 4.9 0.0049 P1 cortex AAAAAAAAAA (658) 245.4 0.2454 P1 cortex AGATCTATAC (2) 22.7 0.0227 P1 cortex TGCTCTGCCT (20) 22.7 0.0227 P1 cortex TGGGTGCTGG (64) 13.6 0.0136 P1 cortex GTTCCAGCCG (2) 9.1 0.0091 P1 cortex TATTTTGTAT (3) 4.5 0.0045 Hypothalamus AAAAAAAAAA (658) 123.2 0.1232 Hypothalamus AGATCTATAC (2) 16.3 0.0163 Hypothalamus TGGGTGCTGG (64) 9.1 0.0091 Hypothalamus GTAGGCTGTT (3) 7.2 0.0072 Hypothalamus TGCTCTGCCT (20) 7.2 0.0072 Hypothalamus GCAAAAAAAG (4) 5.4 0.0054 Hypothalamus CAGATGATGC (6) 3.6 0.0036 Hypothalamus CAAATAAAGC (4) 1.8 0.0018 Hypothalamus GGGGTACCCC (7) 1.8 0.0018 Hypothalamus GTTCCAGCCG (2) 1.8 0.0018 Hypothalamus TTAATGGAAG (2) 1.8 0.0018 Hypothalamus TTAATTGAAG (3) 1.8 0.0018 E12.5 retina AAAAAAAAAA (658) 138.9 0.1389 E12.5 retina AGATCTATAC (2) 28.2 0.0282 E12.5 retina CAAATGAAGT (3) 13.1 0.0131 E12.5 retina GTTCCAGCCG (2) 11.3 0.0113 E12.5 retina TGGGTGCTGG (64) 9.4 0.0094 E12.5 retina GGGGTACCCC (7) 1.9 0.0019 E12.5 retina GTAGGCTGTT (3) 1.9 0.0019 E12.5 retina TGCTCTGCCT (20) 1.9 0.0019 E12.5 retina TTAATTGAAG (3) 1.9 0.0019 E14.5 retina AAAAAAAAAA (658) 94.7 0.0947 E14.5 retina TGGGTGCTGG (64) 54.7 0.0547 E14.5 retina AGATCTATAC (2) 18.2 0.0182 E14.5 retina CAGATGATGC (6) 12.8 0.0128 E14.5 retina TTAATTGAAG (3) 9.1 0.0091 E14.5 retina GGGGTACCCC (7) 5.5 0.0055 E14.5 retina TATTTTGTAT (3) 5.5 0.0055 E14.5 retina AAAATCTTTA (4) 1.8 0.0018 E14.5 retina CAAATGAAGT (3) 1.8 0.0018 E14.5 retina GCAAAAAAAG (4) 1.8 0.0018 E14.5 retina TGCTCTGCCT (20) 1.8 0.0018 E16.5 retina AAAAAAAAAA (658) 43.5 0.0435 E16.5 retina TGGGTGCTGG (64) 41.7 0.0417 E16.5 retina AGATCTATAC (2) 32.6 0.0326 E16.5 retina GGGGTACCCC (7) 9.1 0.0091 E16.5 retina TTAATTGAAG (3) 7.2 0.0072 E16.5 retina CAGATGATGC (6) 5.4 0.0054 E16.5 retina TGCTCTGCCT (20) 3.6 0.0036 E16.5 retina AAAATCTTTA (4) 1.8 0.0018 E16.5 retina ATTACGCCAA (233) 1.8 0.0018 E16.5 retina CAAATGAAGT (3) 1.8 0.0018 E16.5 retina CAGATAAAGC (2) 1.8 0.0018 E16.5 retina GAGGATCTAA (4) 1.8 0.0018 E16.5 retina TTAATGGAAG (2) 1.8 0.0018 E18.5 retina AAAAAAAAAA (658) 374.7 0.3747 E18.5 retina TGGGTGCTGG (64) 20 0.02 E18.5 retina AGATCTATAC (2) 14.6 0.0146 E18.5 retina TGCTCTGCCT (20) 5.5 0.0055 E18.5 retina AAAATCTTTA (4) 1.8 0.0018 E18.5 retina CAGATGATGC (6) 1.8 0.0018 E18.5 retina GCAAAAAAAG (4) 1.8 0.0018 E18.5 retina GGGGTACCCC (7) 1.8 0.0018 E18.5 retina GTTCCAGCCG (2) 1.8 0.0018 E18.5 retina TTAATGGAAG (2) 1.8 0.0018 P0.5 retina AAAAAAAAAA (658) 117.8 0.1178 P0.5 retina AGATCTATAC (2) 45.1 0.0451 P0.5 retina TGGGTGCTGG (64) 11.8 0.0118 P0.5 retina GTAGGCTGTT (3) 9.8 0.0098 P0.5 retina CAAATGAAGT (3) 5.9 0.0059 P0.5 retina GGGGTACCCC (7) 3.9 0.0039 P0.5 retina GTTCCAGCCG (2) 3.9 0.0039 P0.5 retina TGCTCTGCCT (20) 3.9 0.0039 P0.5 retina TTAATTGAAG (3) 3.9 0.0039 P0.5 retina ATTACGCCAA (233) 2 0.002 P0.5 retina CAGATGATGC (6) 2 0.002 P0.5 retina GAATTTTTTT (5) 2 0.002 P2.5 retina AAAAAAAAAA (658) 329.1 0.3291 P2.5 retina AGATCTATAC (2) 21.1 0.0211 P2.5 retina TGGGTGCTGG (64) 17.6 0.0176 P2.5 retina TGCTCTGCCT (20) 10.6 0.0106 P2.5 retina CAAATGAAGT (3) 8.8 0.0088 P2.5 retina CAGATGATGC (6) 3.5 0.0035 P2.5 retina GTATTTGGAT (2) 3.5 0.0035 P2.5 retina GGGGTACCCC (7) 1.8 0.0018 P2.5 retina TATTTTGTAT (3) 1.8 0.0018 P2.5 retina TTAATTGAAG (3) 1.8 0.0018 P4.5 retina AAAAAAAAAA (658) 283.3 0.2833 P4.5 retina TGCTCTGCCT (20) 9.9 0.0099 P4.5 retina TGGGTGCTGG (64) 9.9 0.0099 P4.5 retina AGATCTATAC (2) 5.9 0.0059 P4.5 retina CAAATAAAGC (4) 2 0.002 P4.5 retina CAAATGAAGT (3) 2 0.002 P4.5 retina GAGGATCTAA (4) 2 0.002 P4.5 retina GTATTTGGAT (2) 2 0.002 P4.5 retina GTATTTTTGT 2 0.002 P6.5 retina AAAAAAAAAA (658) 266.8 0.2668 P6.5 retina AGATCTATAC (2) 15 0.015 P6.5 retina TGGGTGCTGG (64) 13.3 0.0133 P6.5 retina GTTCCAGCCG (2) 6.7 0.0067 P6.5 retina CAAATGAAGT (3) 3.3 0.0033 P6.5 retina GTAGGCTGTT (3) 3.3 0.0033 P6.5 retina TGCTCTGCCT (20) 3.3 0.0033 P6.5 retina CAGATAAAGC (2) 1.7 0.0017 P6.5 retina TATTTTGTAT (3) 1.7 0.0017 P6.5 retina TTAATTGAAG (3) 1.7 0.0017 P10.5 crx- retina AGATCTATAC (2) 53.9 0.0539 P10.5 crx- retina AAAAAAAAAA (658) 44.6 0.0446 P10.5 crx- retina TGGGTGCTGG (64) 20.4 0.0204 P10.5 crx- retina AAATCTATAC 3.7 0.0037 P10.5 crx- retina GTATTTTTGT 3.7 0.0037 P10.5 crx- retina TGCTCTGCCT (20) 3.7 0.0037 P10.5 crx- retina CAAATAAAGC (4) 1.9 0.0019 P10.5 crx- retina GGATCTATAC 1.9 0.0019 P10.5 crx- retina GGGGTACCCC (7) 1.9 0.0019 P10.5 crx- retina GTAGGCTGTT (3) 1.9 0.0019 P10.5 crx- retina TTAATTGAAG (3) 1.9 0.0019 P10.5 crx+ retina AAAAAAAAAA (658) 96.1 0.0961 P10.5 crx+ retina TGCTCTGCCT (20) 23.1 0.0231 P10.5 crx+ retina TGGGTGCTGG (64) 15.4 0.0154 P10.5 crx+ retina AGATCTATAC (2) 9.6 0.0096 P10.5 crx+ retina CAAATGAAGT (3) 5.8 0.0058 P10.5 crx+ retina GCAAAAAAAG (4) 3.8 0.0038 P10.5 crx+ retina GTTCCAGCCG (2) 3.8 0.0038 P10.5 crx+ retina AAAATCTTTA (4) 1.9 0.0019 P10.5 crx+ retina CAAATAAAGC (4) 1.9 0.0019 P10.5 crx+ retina GTAGGCTGTT (3) 1.9 0.0019 Adult retinal AAAAAAAAAA (658) 57.4 0.0574 Adult retinal TGCTCTGCCT (20) 16.7 0.0167 Adult retinal AGATCTATAC (2) 14.8 0.0148 Adult retinal TGGGTGCTGG (64) 13 0.013 Adult retinal CAAATGAAGT (3) 9.3 0.0093 Adult retinal ATTACGCCAA (233) 3.7 0.0037 Adult retinal GAATTTTTTT (5) 3.7 0.0037 Adult retinal CAAATAAAGC (4) 1.9 0.0019 Adult retinal GTAGGCTGTT (3) 1.9 0.0019 Adult retinal GTATTTGGAT (2) 1.9 0.0019 Adult retinal GTATTTTTGT 1.9 0.0019 ONL AAAAAAAAAA (658) 103.4 0.1034 ONL TGGGTGCTGG (64) 40.2 0.0402 ONL AGATCTATAC (2) 23 0.023 ONL CAAATGAAGT (3) 7.7 0.0077 ONL TTAATGGAAG (2) 3.8 0.0038 ONL GGGGTACCCC (7) 1.9 0.0019 ONL GTATTTTTGT 1.9 0.0019 ONL TATTTTGTAT (3) 1.9 0.0019 ONL TTAATTGAAG (3) 1.9 0.0019