Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.28207
Zcchc7
zinc finger, CCHC domain containing 7
4
4 21.5 cM
28027
Gene Ontology
nucleic acid binding
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 53 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
AAAAAAAAAA (
658
)
203.9
0.2039
P8 Cb GC
TGTAAAAAAA
(
12
)
4.9
0.0049
Cb medulloblastoma
AAAAAAAAAA (
658
)
797.8
0.7978
Cb medulloblastoma
TGTAAAAAAA
(
12
)
9.2
0.0092
P8 GC+1d culture
AAAAAAAAAA (
658
)
204.3
0.2043
P8 GC+1d culture
TGTAAAAAAA
(
12
)
5.7
0.0057
P8 GC+SHH+1d culture
AAAAAAAAAA (
658
)
278.7
0.2787
P8 GC+SHH+1d culture
TGTAAAAAAA
(
12
)
11.7
0.0117
P8 GC+SHH+1d culture
CTGTTCTGTA
(
4
)
1.2
0.0012
P8 GC+SHH+1d culture
GTTTCAGGCA
(
2
)
1.2
0.0012
3T3 fibroblasts
AAAAAAAAAA (
658
)
28
0.028
E15 cortex
AAAAAAAAAA (
658
)
212.8
0.2128
E15 cortex
TGTAAAAAAA
(
12
)
4.9
0.0049
P1 cortex
AAAAAAAAAA (
658
)
245.4
0.2454
P1 cortex
TAAAATGAAG
(
2
)
4.5
0.0045
P1 cortex
TGTAAAAAAA
(
12
)
4.5
0.0045
Hypothalamus
AAAAAAAAAA (
658
)
123.2
0.1232
Hypothalamus
TGTAAAAAAA
(
12
)
5.4
0.0054
E12.5 retina
AAAAAAAAAA (
658
)
138.9
0.1389
E12.5 retina
TGTAAAAAAA
(
12
)
3.8
0.0038
E12.5 retina
TAAAATGAAG
(
2
)
1.9
0.0019
E12.5 retina
TGTTAAAAAA (
4
)
1.9
0.0019
E14.5 retina
AAAAAAAAAA (
658
)
94.7
0.0947
E14.5 retina
TGTAAAAAAA
(
12
)
5.5
0.0055
E16.5 retina
AAAAAAAAAA (
658
)
43.5
0.0435
E16.5 retina
GTTTCAGGCA
(
2
)
3.6
0.0036
E16.5 retina
CTGTTCTGTA
(
4
)
1.8
0.0018
E16.5 retina
TGTAAAAAAA
(
12
)
1.8
0.0018
E18.5 retina
AAAAAAAAAA (
658
)
374.7
0.3747
E18.5 retina
TGTAAAAAAA
(
12
)
14.6
0.0146
E18.5 retina
TGTTAAAAAA (
4
)
1.8
0.0018
P0.5 retina
AAAAAAAAAA (
658
)
117.8
0.1178
P0.5 retina
TGTAAAAAAA
(
12
)
3.9
0.0039
P2.5 retina
AAAAAAAAAA (
658
)
329.1
0.3291
P2.5 retina
TGTAAAAAAA
(
12
)
3.5
0.0035
P4.5 retina
AAAAAAAAAA (
658
)
283.3
0.2833
P4.5 retina
TGTAAAAAAA
(
12
)
11.9
0.0119
P6.5 retina
AAAAAAAAAA (
658
)
266.8
0.2668
P6.5 retina
TGTAAAAAAA
(
12
)
5
0.005
P6.5 retina
CTGTTCTGTA
(
4
)
3.3
0.0033
P10.5 crx- retina
AAAAAAAAAA (
658
)
44.6
0.0446
P10.5 crx+ retina
AAAAAAAAAA (
658
)
96.1
0.0961
P10.5 crx+ retina
TGTAAAAAAA
(
12
)
7.7
0.0077
P10.5 crx+ retina
CTGTTCTGTA
(
4
)
1.9
0.0019
P10.5 crx+ retina
TAAAATGAAG
(
2
)
1.9
0.0019
P10.5 crx+ retina
TGTTAAAAAA (
4
)
1.9
0.0019
Adult retinal
AAAAAAAAAA (
658
)
57.4
0.0574
Adult retinal
CTGTTCTGTA
(
4
)
3.7
0.0037
Adult retinal
GTTTCAGGCA
(
2
)
3.7
0.0037
Adult retinal
TGTAAAAAAA
(
12
)
3.7
0.0037
ONL
AAAAAAAAAA (
658
)
103.4
0.1034
ONL
TGTAAAAAAA
(
12
)
5.7
0.0057
ONL
CTGTTCTGTA
(
4
)
1.9
0.0019
