Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.28212	Sepx1	selenoprotein X 1	17	17 10.0 cM	27361
Gene Ontology	cytoplasm | nucleus | oxidoreductase activity | protein repair | protein-methionine-R-oxide reductase activity
Human Homolog	SEPX1[selenoprotein X, 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 46 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TTTATTGACT (2) 4.9 0.0049 P8 Cb GC CAGCCTGAAA (6) 1.6 0.0016 Cb medulloblastoma CAGCCTGAAA (6) 9.2 0.0092 Cb medulloblastoma CAGCCTGAGC 6.9 0.0069 P8 GC+1d culture CAGCCTGAAA (6) 1.1 0.0011 P8 GC+1d culture CAGCCTGAGC 1.1 0.0011 P8 GC+1d culture TTTATTGACT (2) 1.1 0.0011 P8 GC+SHH+1d culture CAGCCTGAAA (6) 3.5 0.0035 P8 GC+SHH+1d culture CAGCCTGAGC 2.3 0.0023 P8 GC+SHH+1d culture GACTGGAATG (4) 2.3 0.0023 P8 GC+SHH+1d culture TTTATTGACT (2) 2.3 0.0023 3T3 fibroblasts CAGCCTGAAA (6) 3.5 0.0035 3T3 fibroblasts CAGCCTGAGC 3.5 0.0035 P1 cortex TTTATTGACT (2) 13.6 0.0136 P1 cortex CAGCCTGAGC 4.5 0.0045 Hypothalamus CAGCCTGAAA (6) 5.4 0.0054 Hypothalamus CAGCCTGAGC 1.8 0.0018 Hypothalamus GACTGGAATG (4) 1.8 0.0018 E12.5 retina CAGCCTGAAA (6) 1.9 0.0019 E14.5 retina CAGCCTGAAA (6) 5.5 0.0055 E14.5 retina TTTATTGACT (2) 3.6 0.0036 E16.5 retina CAGCCTGAAA (6) 10.9 0.0109 E16.5 retina CAGCCTGAGC 5.4 0.0054 E16.5 retina TTTATTGACT (2) 1.8 0.0018 E18.5 retina CAGCCTGAAA (6) 16.4 0.0164 E18.5 retina CAGCCTGAGC 1.8 0.0018 P0.5 retina CAGCCTGAAA (6) 7.9 0.0079 P0.5 retina CAGCCTGAGC 2 0.002 P2.5 retina CAGCCTGAAA (6) 7 0.007 P2.5 retina CAGCCTGAGC 1.8 0.0018 P2.5 retina TAGCTTGGAC (2) 1.8 0.0018 P4.5 retina CAGCCTGAAA (6) 4 0.004 P4.5 retina CAGCCTGAGC 2 0.002 P4.5 retina TTTATTGACT (2) 2 0.002 P6.5 retina CAGCCTGAAA (6) 5 0.005 P6.5 retina CAGCCTGAGC 1.7 0.0017 P10.5 crx- retina CAGCCTGAAA (6) 3.7 0.0037 P10.5 crx- retina CAGCCTGAGC 3.7 0.0037 P10.5 crx- retina GACTGGAATG (4) 1.9 0.0019 P10.5 crx- retina TTTATTGACT (2) 1.9 0.0019 P10.5 crx+ retina CAGCCTGAAA (6) 7.7 0.0077 P10.5 crx+ retina TTTATTGACT (2) 1.9 0.0019 Adult retinal CAGCCTGAGC 1.9 0.0019 Adult retinal GACTGGAATG (4) 1.9 0.0019 ONL CAGCCTGAAA (6) 5.7 0.0057 ONL GACTGGAATG (4) 1.9 0.0019