Mouse Retina SAGE Library

[Home]    [Libraries]    [Images]

---

Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

---

UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.282122	D7Wsu128e	DNA segment, Chr 7, Wayne State University 128, expressed	7	7 59.0 cM	28018
Human Homolog	UBPH[similar to ubiquitin binding protein]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 100 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AAAAAAAAAA (658) 203.9 0.2039 P8 Cb GC GGAAGTACAG (2) 8.2 0.0082 P8 Cb GC AAAAACAAAA (12) 1.6 0.0016 P8 Cb GC CACCTTGGTG (3) 1.6 0.0016 P8 Cb GC GAAGAGAGCC (2) 1.6 0.0016 P8 Cb GC TTTTAAATCT (2) 1.6 0.0016 Cb medulloblastoma AAAAAAAAAA (658) 797.8 0.7978 Cb medulloblastoma AAAAACAAAA (12) 37 0.037 Cb medulloblastoma GGAAGTACAG (2) 2.3 0.0023 P8 GC+1d culture AAAAAAAAAA (658) 204.3 0.2043 P8 GC+1d culture AAAAACAAAA (12) 8 0.008 P8 GC+1d culture GGAAGTACAG (2) 4.6 0.0046 P8 GC+1d culture ATGGCGTTTC (4) 2.3 0.0023 P8 GC+1d culture ATGGGCCTTT 2.3 0.0023 P8 GC+1d culture CTTTCCCTTG 1.1 0.0011 P8 GC+1d culture GAAGAGAGCC (2) 1.1 0.0011 P8 GC+SHH+1d culture AAAAAAAAAA (658) 278.7 0.2787 P8 GC+SHH+1d culture AAAAACAAAA (12) 14.1 0.0141 P8 GC+SHH+1d culture GGAAGTACAG (2) 4.7 0.0047 P8 GC+SHH+1d culture ATACAAAATA (4) 1.2 0.0012 P8 GC+SHH+1d culture TAGCAAAGTT (2) 1.2 0.0012 P8 GC+SHH+1d culture TGTGGAATAC 1.2 0.0012 3T3 fibroblasts AAAAAAAAAA (658) 28 0.028 3T3 fibroblasts CACCTTGGTG (3) 10.5 0.0105 E15 cortex AAAAAAAAAA (658) 212.8 0.2128 E15 cortex AAAAACAAAA (12) 4.9 0.0049 P1 cortex AAAAAAAAAA (658) 245.4 0.2454 P1 cortex AAAAACAAAA (12) 4.5 0.0045 P1 cortex ATGGGCCTTT 4.5 0.0045 P1 cortex GGAAGTACAG (2) 4.5 0.0045 P1 cortex TAGCAAAGTT (2) 4.5 0.0045 P1 cortex TTAAGAAATA (2) 4.5 0.0045 Hypothalamus AAAAAAAAAA (658) 123.2 0.1232 Hypothalamus GGAAGTACAG (2) 5.4 0.0054 Hypothalamus AAAAACAAAA (12) 3.6 0.0036 Hypothalamus ATACAAAATA (4) 1.8 0.0018 Hypothalamus TGTGGAATAC 1.8 0.0018 Hypothalamus TTAAGAAATA (2) 1.8 0.0018 E12.5 retina AAAAAAAAAA (658) 138.9 0.1389 E12.5 retina AAAAACAAAA (12) 13.1 0.0131 E12.5 retina GGAAGTACAG (2) 9.4 0.0094 E12.5 retina ATGGCGTTTC (4) 1.9 0.0019 E12.5 retina TGTGGAATAC 1.9 0.0019 E14.5 retina AAAAAAAAAA (658) 94.7 0.0947 E14.5 retina AAAAACAAAA (12) 5.5 0.0055 E14.5 retina GGAAGTACAG (2) 3.6 0.0036 E14.5 retina ATACAAAATA (4) 1.8 0.0018 E14.5 retina TAGCAAAGTT (2) 1.8 0.0018 E14.5 retina TGTGGAAAAA (5) 1.8 0.0018 E14.5 retina TGTGGAATAC 1.8 0.0018 E14.5 retina TTAAGAAATA (2) 1.8 0.0018 E16.5 retina AAAAAAAAAA (658) 43.5 0.0435 E16.5 retina GGAAGTACAG (2) 7.2 0.0072 E16.5 retina TTTTAAATCT (2) 1.8 0.0018 E18.5 retina AAAAAAAAAA (658) 374.7 0.3747 E18.5 retina GGAAGTACAG (2) 12.7 0.0127 E18.5 retina AAAAACAAAA (12) 3.6 0.0036 E18.5 retina ATGGGCCTTT 1.8 0.0018 E18.5 retina TAGCAAAGTT (2) 1.8 0.0018 E18.5 retina TGTGGAAAAA (5) 1.8 0.0018 E18.5 retina TTAAGAAATA (2) 1.8 0.0018 P0.5 retina AAAAAAAAAA (658) 117.8 0.1178 P0.5 retina GGAAGTACAG (2) 11.8 0.0118 P0.5 retina ATGGGCCTTT 5.9 0.0059 P0.5 retina CCCTGCCATT 5.9 0.0059 P0.5 retina AAAAACAAAA (12) 2 0.002 P0.5 retina TTAAGAAATA (2) 2 0.002 P2.5 retina AAAAAAAAAA (658) 329.1 0.3291 P2.5 retina AAAAACAAAA (12) 3.5 0.0035 P2.5 retina ATACAAAATA (4) 3.5 0.0035 P2.5 retina GGAAGTACAG (2) 3.5 0.0035 P2.5 retina TGTGGAAAAA (5) 1.8 0.0018 P4.5 retina AAAAAAAAAA (658) 283.3 0.2833 P4.5 retina AAAAACAAAA (12) 4 0.004 P4.5 retina GGAAGTACAG (2) 4 0.004 P4.5 retina TGTGGAAAAA (5) 4 0.004 P4.5 retina TGTGGAATAC 4 0.004 P4.5 retina TTTTAAATCT (2) 2 0.002 P6.5 retina AAAAAAAAAA (658) 266.8 0.2668 P6.5 retina GGAAGTACAG (2) 3.3 0.0033 P6.5 retina ATGGGCCTTT 1.7 0.0017 P6.5 retina TGTGGAATAC 1.7 0.0017 P10.5 crx- retina AAAAAAAAAA (658) 44.6 0.0446 P10.5 crx- retina CTTTCCCTTG 3.7 0.0037 P10.5 crx- retina GGAAGTACAG (2) 3.7 0.0037 P10.5 crx- retina AAAAACAAAA (12) 1.9 0.0019 P10.5 crx- retina ATGGGCCTTT 1.9 0.0019 P10.5 crx- retina TTTTAAATCT (2) 1.9 0.0019 P10.5 crx+ retina AAAAAAAAAA (658) 96.1 0.0961 P10.5 crx+ retina ATACAAAATA (4) 3.8 0.0038 P10.5 crx+ retina GAAGAGAGCC (2) 1.9 0.0019 P10.5 crx+ retina GGAAGTACAG (2) 1.9 0.0019 Adult retinal AAAAAAAAAA (658) 57.4 0.0574 Adult retinal GGAAGTACAG (2) 5.6 0.0056 Adult retinal AAAAACAAAA (12) 1.9 0.0019 ONL AAAAAAAAAA (658) 103.4 0.1034 ONL AAAAACAAAA (12) 3.8 0.0038 ONL GAAGAGAGCC (2) 3.8 0.0038 ONL ATACAAAATA (4) 1.9 0.0019 ONL GGAAGTACAG (2) 1.9 0.0019