Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.282158	Cct5	chaperonin subunit 5 (epsilon)	15		12465
Gene Ontology	ATP binding | protein binding | protein folding
Human Homolog	CCT5[chaperonin containing TCP1, subunit 5 (epsilon)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 85 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TCATAGAAAC (4) 17.9 0.0179 P8 Cb GC TCTGTGGAGG (3) 4.9 0.0049 P8 Cb GC GTCTGTGGAG (5) 3.3 0.0033 P8 Cb GC ACTGAAGTTC (4) 1.6 0.0016 P8 Cb GC GCACAGGGAG (4) 1.6 0.0016 P8 Cb GC GTTCTGGTGG (7) 1.6 0.0016 Cb medulloblastoma TCATAGAAAC (4) 9.2 0.0092 Cb medulloblastoma GCACAGGGAG (4) 2.3 0.0023 Cb medulloblastoma GTCTGTGGAG (5) 2.3 0.0023 P8 GC+1d culture TCATAGAAAC (4) 27.4 0.0274 P8 GC+1d culture GTCTGTGGAG (5) 4.6 0.0046 P8 GC+SHH+1d culture TCATAGAAAC (4) 14.1 0.0141 P8 GC+SHH+1d culture GTCTGTGGAG (5) 2.3 0.0023 P8 GC+SHH+1d culture ATGCCCTGTG (2) 1.2 0.0012 P8 GC+SHH+1d culture CTGATACTGC 1.2 0.0012 P8 GC+SHH+1d culture TCATTGAAAC 1.2 0.0012 P8 GC+SHH+1d culture TCTGTGGAGG (3) 1.2 0.0012 3T3 fibroblasts TCATAGAAAC (4) 14 0.014 3T3 fibroblasts GTCTGTGGAG (5) 7 0.007 E15 cortex TCATAGAAAC (4) 9.9 0.0099 E15 cortex ACTGAAGTTC (4) 4.9 0.0049 E15 cortex CCTGTGGAGG (2) 4.9 0.0049 P1 cortex TCATAGAAAC (4) 13.6 0.0136 P1 cortex GTCTGTGGAG (5) 9.1 0.0091 Hypothalamus TCATAGAAAC (4) 10.9 0.0109 Hypothalamus TCATTGAAAC 3.6 0.0036 Hypothalamus GCACAGGGAG (4) 1.8 0.0018 E12.5 retina TCATAGAAAC (4) 18.8 0.0188 E12.5 retina GATGGATGCC (2) 3.8 0.0038 E12.5 retina GTCTGTGGAG (5) 3.8 0.0038 E12.5 retina GCAACAGGGA (5) 1.9 0.0019 E12.5 retina GTTCTGGTGG (7) 1.9 0.0019 E14.5 retina TCATAGAAAC (4) 27.3 0.0273 E14.5 retina TCATAAAAAC 3.6 0.0036 E14.5 retina GCACAGGGAG (4) 1.8 0.0018 E14.5 retina GCATACTGTT (10) 1.8 0.0018 E14.5 retina TCTGTGGAGG (3) 1.8 0.0018 E16.5 retina TCATAGAAAC (4) 19.9 0.0199 E16.5 retina ATGCCCTGTG (2) 1.8 0.0018 E16.5 retina GCATACTGTT (10) 1.8 0.0018 E16.5 retina GTCTGTGGAG (5) 1.8 0.0018 E18.5 retina CTGATACTGC 3.6 0.0036 E18.5 retina TCATAGAAAC (4) 1.8 0.0018 E18.5 retina TCTGTGGAGG (3) 1.8 0.0018 P0.5 retina TCATAGAAAC (4) 9.8 0.0098 P0.5 retina GTCTGTGGAG (5) 5.9 0.0059 P0.5 retina GCACAGGGAG (4) 2 0.002 P0.5 retina GTTCTGGTGG (7) 2 0.002 P2.5 retina TCATAGAAAC (4) 12.3 0.0123 P2.5 retina ACTGAAGTTC (4) 1.8 0.0018 P2.5 retina CTGATACTGC 1.8 0.0018 P2.5 retina GCACAGGGAG (4) 1.8 0.0018 P2.5 retina GTCTGTGGAG (5) 1.8 0.0018 P2.5 retina GTTCTGGTGG (7) 1.8 0.0018 P2.5 retina TCATTGAAAC 1.8 0.0018 P4.5 retina TCATAGAAAC (4) 5.9 0.0059 P4.5 retina TCATTGAAAC 4 0.004 P4.5 retina CCTGTGGAGG (2) 2 0.002 P6.5 retina TCATAGAAAC (4) 11.7 0.0117 P6.5 retina TCATTGAAAC 10 0.01 P6.5 retina GATGGATGCC (2) 1.7 0.0017 P6.5 retina GCAACAGGGA (5) 1.7 0.0017 P6.5 retina GCATACTGTT (10) 1.7 0.0017 P6.5 retina GTCTGTGGAG (5) 1.7 0.0017 P6.5 retina GTTCTGGTGG (7) 1.7 0.0017 P10.5 crx- retina TCATAGAAAC (4) 26 0.026 P10.5 crx- retina GTCTGTGGAG (5) 5.6 0.0056 P10.5 crx- retina GTTCTGGTGG (7) 3.7 0.0037 P10.5 crx- retina ATGCCCTGTG (2) 1.9 0.0019 P10.5 crx- retina GATGGATGCC (2) 1.9 0.0019 P10.5 crx- retina TCATAAAAAC 1.9 0.0019 P10.5 crx- retina TCATTGAAAC 1.9 0.0019 P10.5 crx- retina TCTGTGGAGG (3) 1.9 0.0019 P10.5 crx+ retina TCATAGAAAC (4) 7.7 0.0077 P10.5 crx+ retina GTCTGTGGAG (5) 3.8 0.0038 P10.5 crx+ retina TCATAAAAAC 1.9 0.0019 Adult retinal TCATAGAAAC (4) 5.6 0.0056 Adult retinal GCAACAGGGA (5) 1.9 0.0019 Adult retinal GTCTGTGGAG (5) 1.9 0.0019 Adult retinal GTTCTGGTGG (7) 1.9 0.0019 Adult retinal TCTGTGGAGG (3) 1.9 0.0019 ONL TCATTGAAAC 5.7 0.0057 ONL TCATAGAAAC (4) 3.8 0.0038 ONL CCTGTGGAGG (2) 1.9 0.0019 ONL GTTCTGGTGG (7) 1.9 0.0019