Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.28237
Stx12
syntaxin 12
4
100226
Mm.28237
C530007A02Rik
RIKEN cDNA C530007A02 gene
4
77625
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 51 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
TGGGAAAGAG
(
2
)
4.9
0.0049
P8 Cb GC
CATAAGTTTC
(
3
)
3.3
0.0033
P8 Cb GC
TGGGATTTTG (
5
)
3.3
0.0033
Cb medulloblastoma
CATAAGTTTC
(
3
)
6.9
0.0069
P8 GC+1d culture
CATAAGTTTC
(
3
)
4.6
0.0046
P8 GC+1d culture
AGAGCTTTGA
(
2
)
2.3
0.0023
P8 GC+1d culture
TGGGATTTTG (
5
)
1.1
0.0011
P8 GC+SHH+1d culture
CATAAGTTTC
(
3
)
3.5
0.0035
P8 GC+SHH+1d culture
TGGGAAAGAG
(
2
)
3.5
0.0035
P8 GC+SHH+1d culture
AGAGCTTTGA
(
2
)
2.3
0.0023
P8 GC+SHH+1d culture
ATTCCATCTC
(
2
)
2.3
0.0023
P8 GC+SHH+1d culture
GAGACAGTAT
(
2
)
1.2
0.0012
3T3 fibroblasts
TGGGCCCTTG
(
2
)
3.5
0.0035
E15 cortex
CATAAGTTTC
(
3
)
4.9
0.0049
P1 cortex
CATAAGTTTC
(
3
)
9.1
0.0091
P1 cortex
AGAGCTTTGA
(
2
)
4.5
0.0045
P1 cortex
TGGGAAAGAG
(
2
)
4.5
0.0045
Hypothalamus
CATAAGTTTC
(
3
)
3.6
0.0036
Hypothalamus
TGGGCCCTTG
(
2
)
3.6
0.0036
Hypothalamus
AGAGCTTTGA
(
2
)
1.8
0.0018
E12.5 retina
CATAAGTTTC
(
3
)
1.9
0.0019
E12.5 retina
GAGACAGTAT
(
2
)
1.9
0.0019
E12.5 retina
TGCTGGGATT (
12
)
1.9
0.0019
E14.5 retina
CATAAGTTTC
(
3
)
9.1
0.0091
E16.5 retina
TGGGCCCTTG
(
2
)
1.8
0.0018
E18.5 retina
TGCTGGGATT (
12
)
7.3
0.0073
E18.5 retina
CATAAGTTTC
(
3
)
5.5
0.0055
P0.5 retina
CATAAGTTTC
(
3
)
2
0.002
P0.5 retina
TGGGATTTTG (
5
)
2
0.002
P2.5 retina
CATAAGTTTC
(
3
)
7
0.007
P2.5 retina
GAGACAGTAT
(
2
)
3.5
0.0035
P2.5 retina
TGCTGGGATT (
12
)
1.8
0.0018
P2.5 retina
TGGGAAAGAG
(
2
)
1.8
0.0018
P2.5 retina
TGGGCCCTTG
(
2
)
1.8
0.0018
P4.5 retina
CATAAGTTTC
(
3
)
4
0.004
P4.5 retina
TGGGATTTTG (
5
)
4
0.004
P4.5 retina
TGGGAAAGAG
(
2
)
2
0.002
P4.5 retina
TGGGCCCTTG
(
2
)
2
0.002
P6.5 retina
CATAAGTTTC
(
3
)
3.3
0.0033
P6.5 retina
TGGGATTTTG (
5
)
3.3
0.0033
P6.5 retina
GAGACAGTAT
(
2
)
1.7
0.0017
P6.5 retina
TGCTGGGATT (
12
)
1.7
0.0017
P10.5 crx- retina
ATTCCATCTC
(
2
)
7.4
0.0074
P10.5 crx- retina
CATAAGTTTC
(
3
)
7.4
0.0074
P10.5 crx- retina
AGAGCTTTGA
(
2
)
1.9
0.0019
Adult retinal
CATAAGTTTC
(
3
)
3.7
0.0037
Adult retinal
TGCTGGGATT (
12
)
3.7
0.0037
Adult retinal
AGAGCTTTGA
(
2
)
1.9
0.0019
Adult retinal
TGGGAAAGAG
(
2
)
1.9
0.0019
ONL
CATAAGTTTC
(
3
)
3.8
0.0038
ONL
TGCTGGGATT (
12
)
3.8
0.0038
