Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.282743	Ikbkap	inhibitor of kappa light polypeptide enhancer in B-cells, kinase complex-associated protein	4	4 27.0 cM	230233
Gene Ontology	biological_process unknown | cellular_component unknown | kinase activity | protein binding
Human Homolog	IKBKAP[inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase complex-associated protein] | IKBKAP[inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase complex-associated protein]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 116 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AAAAAAAAAA (658) 203.9 0.2039 P8 Cb GC TAGGCAGTTA (2) 6.5 0.0065 P8 Cb GC TGGTACACAA (3) 4.9 0.0049 P8 Cb GC GACATTTTAC (5) 3.3 0.0033 P8 Cb GC ATTCCGAATT (107) 1.6 0.0016 P8 Cb GC GTTTCAAGAG (4) 1.6 0.0016 Cb medulloblastoma AAAAAAAAAA (658) 797.8 0.7978 Cb medulloblastoma TAGGCAGTTA (2) 6.9 0.0069 Cb medulloblastoma CCTATAATCC (15) 2.3 0.0023 Cb medulloblastoma GTTTCAAGAG (4) 2.3 0.0023 Cb medulloblastoma TGGTACACAA (3) 2.3 0.0023 P8 GC+1d culture AAAAAAAAAA (658) 204.3 0.2043 P8 GC+1d culture TTTCATTGTT (6) 8 0.008 P8 GC+1d culture TAGGCAGTTA (2) 3.4 0.0034 P8 GC+1d culture GACATTTTAC (5) 2.3 0.0023 P8 GC+1d culture GACATTTTTA (4) 2.3 0.0023 P8 GC+1d culture TGGTACACAA (3) 2.3 0.0023 P8 GC+1d culture CCTATAATCC (15) 1.1 0.0011 P8 GC+1d culture GACTTTCTGG (4) 1.1 0.0011 P8 GC+1d culture GTTTCAAGAG (4) 1.1 0.0011 P8 GC+SHH+1d culture AAAAAAAAAA (658) 278.7 0.2787 P8 GC+SHH+1d culture TAGGCAGTTA (2) 5.9 0.0059 P8 GC+SHH+1d culture TTTCATTGTT (6) 4.7 0.0047 P8 GC+SHH+1d culture TGGTACACAA (3) 3.5 0.0035 P8 GC+SHH+1d culture AAGAGCAAGC (3) 2.3 0.0023 P8 GC+SHH+1d culture GACATTTTAC (5) 2.3 0.0023 P8 GC+SHH+1d culture GACATTTTTA (4) 2.3 0.0023 P8 GC+SHH+1d culture GTTTCAAGAG (4) 2.3 0.0023 P8 GC+SHH+1d culture GACTTTCTGG (4) 1.2 0.0012 P8 GC+SHH+1d culture GATTCCACAG (3) 1.2 0.0012 3T3 fibroblasts AAAAAAAAAA (658) 28 0.028 3T3 fibroblasts GTTTCAAGAG (4) 3.5 0.0035 E15 cortex AAAAAAAAAA (658) 212.8 0.2128 E15 cortex GATTCCACAG (3) 9.9 0.0099 E15 cortex CCTATAATCC (15) 4.9 0.0049 E15 cortex GTTTCAAGAG (4) 4.9 0.0049 E15 cortex TAGGCAGTTA (2) 4.9 0.0049 P1 cortex AAAAAAAAAA (658) 245.4 0.2454 P1 cortex GTTTCAAGAG (4) 22.7 0.0227 P1 cortex TAGGCAGTTA (2) 13.6 0.0136 P1 cortex TTTCATTGTT (6) 9.1 0.0091 P1 cortex CCTATAATCC (15) 4.5 0.0045 Hypothalamus AAAAAAAAAA (658) 123.2 0.1232 Hypothalamus AGGCCAGTGG (4) 7.2 0.0072 Hypothalamus GACATTTTTA (4) 1.8 0.0018 Hypothalamus GGGAAGATTC (2) 1.8 0.0018 Hypothalamus TAGGCAGTTA (2) 1.8 0.0018 E12.5 retina AAAAAAAAAA (658) 138.9 0.1389 E12.5 retina TAGGCAGTTA (2) 7.5 0.0075 E12.5 retina GACATTTTAC (5) 3.8 0.0038 E12.5 retina TGGTACACAA (3) 3.8 0.0038 E12.5 retina CTGGTCTTGA (5) 1.9 0.0019 E14.5 retina AAAAAAAAAA (658) 94.7 0.0947 E14.5 retina TAGGCAGTTA (2) 3.6 0.0036 E14.5 retina GACATTTTAC (5) 1.8 0.0018 E14.5 retina TGGTACACAA (3) 1.8 0.0018 E14.5 retina TTTCATTGTT (6) 1.8 0.0018 E16.5 retina AAAAAAAAAA (658) 43.5 0.0435 E16.5 retina CCTATAATCC (15) 3.6 0.0036 E16.5 retina TAGGCAGTTA (2) 3.6 0.0036 E16.5 retina AAGAGCAAGC (3) 1.8 0.0018 E16.5 retina CTGGTCTTGA (5) 1.8 0.0018 E16.5 retina GACATTTTAC (5) 1.8 0.0018 E16.5 retina TGGTACACAA (3) 1.8 0.0018 E18.5 retina AAAAAAAAAA (658) 374.7 0.3747 E18.5 retina TGGTACACAA (3) 3.6 0.0036 E18.5 retina GGGAAGATTC (2) 1.8 0.0018 E18.5 retina TAGGCAGTTA (2) 1.8 0.0018 P0.5 retina AAAAAAAAAA (658) 117.8 0.1178 P0.5 retina GTTTCAAGAG (4) 9.8 0.0098 P0.5 retina TTTCATTGTT (6) 5.9 0.0059 P0.5 retina TAGGCAGTTA (2) 2 0.002 P2.5 retina AAAAAAAAAA (658) 329.1 0.3291 P2.5 retina TAGGCAGTTA (2) 10.6 0.0106 P2.5 retina CCTATAATCC (15) 1.8 0.0018 P2.5 retina GACATTTTAC (5) 1.8 0.0018 P2.5 retina GACATTTTTA (4) 1.8 0.0018 P2.5 retina TGGTACACAA (3) 1.8 0.0018 P4.5 retina AAAAAAAAAA (658) 283.3 0.2833 P4.5 retina TGGTACACAA (3) 7.9 0.0079 P4.5 retina TAGGCAGTTA (2) 5.9 0.0059 P4.5 retina ATTCCGAATT (107) 2 0.002 P4.5 retina CTGGTCTTGA (5) 2 0.002 P4.5 retina GGGAAGATTC (2) 2 0.002 P4.5 retina TTTCATTGTT (6) 2 0.002 P6.5 retina AAAAAAAAAA (658) 266.8 0.2668 P6.5 retina TGGTACACAA (3) 6.7 0.0067 P6.5 retina ATTCCGAATT (107) 3.3 0.0033 P6.5 retina TAGGCAGTTA (2) 3.3 0.0033 P6.5 retina CCTATAATCC (15) 1.7 0.0017 P6.5 retina GACATTTTTA (4) 1.7 0.0017 P10.5 crx- retina AAAAAAAAAA (658) 44.6 0.0446 P10.5 crx- retina TAGGCAGTTA (2) 7.4 0.0074 P10.5 crx- retina GTTTCAAGAG (4) 3.7 0.0037 P10.5 crx- retina GATTCCACAG (3) 1.9 0.0019 P10.5 crx- retina TGGTACACAA (3) 1.9 0.0019 P10.5 crx+ retina AAAAAAAAAA (658) 96.1 0.0961 P10.5 crx+ retina TGGTACACAA (3) 5.8 0.0058 P10.5 crx+ retina CTGGTCTTGA (5) 3.8 0.0038 P10.5 crx+ retina GACTTTCTGG (4) 3.8 0.0038 P10.5 crx+ retina TAGGCAGTTA (2) 3.8 0.0038 P10.5 crx+ retina GTTTCAAGAG (4) 1.9 0.0019 Adult retinal AAAAAAAAAA (658) 57.4 0.0574 Adult retinal TGGTACACAA (3) 5.6 0.0056 Adult retinal GACATTTTAC (5) 3.7 0.0037 Adult retinal GTTTCAAGAG (4) 3.7 0.0037 Adult retinal TTTCATTGTT (6) 3.7 0.0037 Adult retinal AGGCCAGTGG (4) 1.9 0.0019 Adult retinal GACTTTCTGG (4) 1.9 0.0019 Adult retinal TAGGCAGTTA (2) 1.9 0.0019 ONL AAAAAAAAAA (658) 103.4 0.1034 ONL ATTCCGAATT (107) 3.8 0.0038 ONL CCTATAATCC (15) 3.8 0.0038 ONL TAGGCAGTTA (2) 3.8 0.0038 ONL GTTTCAAGAG (4) 1.9 0.0019 ONL TGGTACACAA (3) 1.9 0.0019