Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.283283
Tagln
transgelin
9
9 27.0 cM
21345
Gene Ontology
cytoskeleton organization and biogenesis
|
muscle development
Human Homolog
TAGLN[transgelin]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 34 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
TGCAGTCATC (
4
)
14.7
0.0147
Cb medulloblastoma
TGCAGTCATC (
4
)
4.6
0.0046
P8 GC+1d culture
TGCAGTCATC (
4
)
9.1
0.0091
P8 GC+1d culture
GGCAGCTCCC
1.1
0.0011
P8 GC+SHH+1d culture
TGCAGTCATC (
4
)
18.7
0.0187
3T3 fibroblasts
GGCAGCTCCC
21
0.021
3T3 fibroblasts
TGCAGTCATC (
4
)
17.5
0.0175
3T3 fibroblasts
GCTGTGACCA (
3
)
3.5
0.0035
3T3 fibroblasts
GTGGGTGGGT (
5
)
3.5
0.0035
P1 cortex
TGCAGTCATC (
4
)
4.5
0.0045
Hypothalamus
GCTGTGACCA (
3
)
9.1
0.0091
Hypothalamus
TGCAGTCATC (
4
)
5.4
0.0054
Hypothalamus
GGCAGCTCCC
1.8
0.0018
E12.5 retina
TGCAGTCATC (
4
)
30
0.03
E14.5 retina
TGCAGTCATC (
4
)
9.1
0.0091
E16.5 retina
TGCAGTCATC (
4
)
16.3
0.0163
E18.5 retina
TGCAGTCATC (
4
)
18.2
0.0182
P0.5 retina
TGCAGTCATC (
4
)
11.8
0.0118
P0.5 retina
GTGGGTGGGT (
5
)
2
0.002
P2.5 retina
TGCAGTCATC (
4
)
24.6
0.0246
P4.5 retina
TGCAGTCATC (
4
)
21.8
0.0218
P4.5 retina
AGCCGAGAAG
(
3
)
2
0.002
P6.5 retina
TGCAGTCATC (
4
)
11.7
0.0117
P6.5 retina
GCTGTGACCA (
3
)
3.3
0.0033
P10.5 crx- retina
TGCAGTCATC (
4
)
7.4
0.0074
P10.5 crx- retina
GCTGTGACCA (
3
)
1.9
0.0019
P10.5 crx- retina
GGCAGCTCCC
1.9
0.0019
P10.5 crx+ retina
TGCAGTCATC (
4
)
9.6
0.0096
P10.5 crx+ retina
GCTGTGACCA (
3
)
3.8
0.0038
P10.5 crx+ retina
GTGGGTGGGT (
5
)
1.9
0.0019
Adult retinal
GCTGTGACCA (
3
)
5.6
0.0056
Adult retinal
AGCCGAGAAG
(
3
)
3.7
0.0037
Adult retinal
TGCAGTCATC (
4
)
1.9
0.0019
ONL
TGCAGTCATC (
4
)
3.8
0.0038
