Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.283410
D11Ertd530e
DNA segment, Chr 11, ERATO Doi 530, expressed
11
11 B5 (11 47.2 cM)
52615
Mm.283410
BC037438
cDNA sequence BC037438
11
403345
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
Total 10 In Situ Hybridization Images
Images -- Click to Enlarge
SAGE Tags
Total 65 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
TAAGATGATA
(
2
)
4.9
0.0049
P8 Cb GC
CCTGTATGTG
(
2
)
1.6
0.0016
P8 Cb GC
GGGGACTTTT (
8
)
1.6
0.0016
Cb medulloblastoma
GGGGACTTTT (
8
)
6.9
0.0069
Cb medulloblastoma
GGAAATGTTC
(
3
)
2.3
0.0023
Cb medulloblastoma
GTGTCTTCAG
(
2
)
2.3
0.0023
Cb medulloblastoma
TAAGATGATA
(
2
)
2.3
0.0023
P8 GC+1d culture
TAAGATGATA
(
2
)
8
0.008
P8 GC+1d culture
CAGGAAATGG
(
3
)
1.1
0.0011
P8 GC+1d culture
GGGGACTTTT (
8
)
1.1
0.0011
P8 GC+1d culture
TAAAATATAT (
5
)
1.1
0.0011
P8 GC+SHH+1d culture
TAAGATGATA
(
2
)
4.7
0.0047
P8 GC+SHH+1d culture
GGGGACTTTT (
8
)
2.3
0.0023
P8 GC+SHH+1d culture
GGAAATGTTC
(
3
)
1.2
0.0012
3T3 fibroblasts
GTCATAGCTG (
590
)
10.5
0.0105
3T3 fibroblasts
CCTGTATGTG
(
2
)
3.5
0.0035
3T3 fibroblasts
GTGTCTTCAG
(
2
)
3.5
0.0035
E15 cortex
CATCTGGGGA (
6
)
14.8
0.0148
E15 cortex
GGGGACTTTT (
8
)
4.9
0.0049
E15 cortex
GTCATAGCTG (
590
)
4.9
0.0049
Hypothalamus
CAGCCGTGCA (
4
)
1.8
0.0018
Hypothalamus
CAGGAAATGG
(
3
)
1.8
0.0018
E12.5 retina
AGTTTAAGGC (
6
)
1.9
0.0019
E12.5 retina
CAGGAAATGG
(
3
)
1.9
0.0019
E12.5 retina
GGGGACTTTT (
8
)
1.9
0.0019
E12.5 retina
TAAGATGATA
(
2
)
1.9
0.0019
E14.5 retina
GGGGACTTTT (
8
)
1.8
0.0018
E16.5 retina
GGAAATGTTC
(
3
)
1.8
0.0018
E18.5 retina
TAAGATGATA
(
2
)
5.5
0.0055
E18.5 retina
CAGCCGTGCA (
4
)
1.8
0.0018
P0.5 retina
CAGGAAATGG
(
3
)
7.9
0.0079
P0.5 retina
GTCATAGCTG (
590
)
3.9
0.0039
P0.5 retina
AGTTTAAGGC (
6
)
2
0.002
P0.5 retina
GGGGACTTTT (
8
)
2
0.002
P0.5 retina
TAAGATGATA
(
2
)
2
0.002
P2.5 retina
TAAGATGATA
(
2
)
8.8
0.0088
P2.5 retina
AGTTTAAGGC (
6
)
3.5
0.0035
P2.5 retina
CAGCCGTGCA (
4
)
1.8
0.0018
P2.5 retina
CAGGAAATGG
(
3
)
1.8
0.0018
P2.5 retina
GGGGACTTTT (
8
)
1.8
0.0018
P2.5 retina
GTCATAGCTG (
590
)
1.8
0.0018
P2.5 retina
GTGTCTTCAG
(
2
)
1.8
0.0018
P2.5 retina
TAAGTAAGAG
(
2
)
1.8
0.0018
P4.5 retina
TAAGATGATA
(
2
)
7.9
0.0079
P4.5 retina
GGGGACTTTT (
8
)
4
0.004
P4.5 retina
CAGGAAATGG
(
3
)
2
0.002
P4.5 retina
GTCATAGCTG (
590
)
2
0.002
P4.5 retina
TAAGTAAGAG
(
2
)
2
0.002
P6.5 retina
GTCATAGCTG (
590
)
3.3
0.0033
P6.5 retina
GGGGACTTTT (
8
)
1.7
0.0017
P10.5 crx- retina
CCTGTATGTG
(
2
)
1.9
0.0019
P10.5 crx- retina
TAAAATATAT (
5
)
1.9
0.0019
P10.5 crx+ retina
GGGGACTTTT (
8
)
3.8
0.0038
P10.5 crx+ retina
TAAGATGATA
(
2
)
3.8
0.0038
P10.5 crx+ retina
AGTTTAAGGC (
6
)
1.9
0.0019
P10.5 crx+ retina
CAGCCGTGCA (
4
)
1.9
0.0019
P10.5 crx+ retina
GTGTCTTCAG
(
2
)
1.9
0.0019
Adult retinal
CAGGAAATGG
(
3
)
3.7
0.0037
Adult retinal
GGGGACTTTT (
8
)
3.7
0.0037
Adult retinal
GTCATAGCTG (
590
)
1.9
0.0019
Adult retinal
GTGTCTTCAG
(
2
)
1.9
0.0019
ONL
GTCATAGCTG (
590
)
5.7
0.0057
ONL
TAAAATATAT (
5
)
3.8
0.0038
ONL
AGTTTAAGGC (
6
)
1.9
0.0019
ONL
TAAGTAAGAG
(
2
)
1.9
0.0019
