Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.28349
1500032D16Rik
RIKEN cDNA 1500032D16 gene
17
78330
Gene Ontology
mitochondrion
Human Homolog
NDUFV3[NADH dehydrogenase (ubiquinone) flavoprotein 3, 10kDa]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 57 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
AATCCTTGCC
(
2
)
14.7
0.0147
P8 Cb GC
GTGCTGGAGG (
10
)
3.3
0.0033
Cb medulloblastoma
AATCCTTGCC
(
2
)
43.9
0.0439
P8 GC+1d culture
AATCCTTGCC
(
2
)
29.7
0.0297
P8 GC+1d culture
CGTGTTCAAC (
3
)
5.7
0.0057
P8 GC+SHH+1d culture
AATCCTTGCC
(
2
)
21.1
0.0211
P8 GC+SHH+1d culture
CGTGTTCAAC (
3
)
3.5
0.0035
P8 GC+SHH+1d culture
GTGCTGGAGG (
10
)
2.3
0.0023
3T3 fibroblasts
AATCCTTGCC
(
2
)
10.5
0.0105
3T3 fibroblasts
GTCATAGCTG (
590
)
10.5
0.0105
3T3 fibroblasts
GTGCTGCAGG
(
4
)
7
0.007
3T3 fibroblasts
GTGCTGGAGG (
10
)
3.5
0.0035
E15 cortex
GTCATAGCTG (
590
)
4.9
0.0049
E15 cortex
GTGCTGGAGG (
10
)
4.9
0.0049
Hypothalamus
AATCCTTGCC
(
2
)
47.1
0.0471
Hypothalamus
GTGCTGCAGG
(
4
)
12.7
0.0127
Hypothalamus
GTGCTGGAGG (
10
)
1.8
0.0018
E12.5 retina
AATCCTTGCC
(
2
)
30
0.03
E12.5 retina
GTGCTGGAGG (
10
)
5.6
0.0056
E14.5 retina
AATCCTTGCC
(
2
)
34.6
0.0346
E14.5 retina
GTGCTGCAGG
(
4
)
9.1
0.0091
E14.5 retina
GTGCTGGAGG (
10
)
3.6
0.0036
E14.5 retina
ACTACAACAC
1.8
0.0018
E16.5 retina
AATCCTTGCC
(
2
)
63.4
0.0634
E16.5 retina
GTGCTGGAGG (
10
)
3.6
0.0036
E16.5 retina
ACTACAACAC
1.8
0.0018
E16.5 retina
CGTGTTCAAC (
3
)
1.8
0.0018
E16.5 retina
GCGGTCTCTC
(
2
)
1.8
0.0018
E16.5 retina
GTGCTGCAGG
(
4
)
1.8
0.0018
E18.5 retina
AATCCTTGCC
(
2
)
41.8
0.0418
E18.5 retina
GTGCTGCAGG
(
4
)
3.6
0.0036
P0.5 retina
AATCCTTGCC
(
2
)
33.4
0.0334
P0.5 retina
GTCATAGCTG (
590
)
3.9
0.0039
P0.5 retina
GTGCTGCAGG
(
4
)
2
0.002
P2.5 retina
AATCCTTGCC
(
2
)
59.8
0.0598
P2.5 retina
GTGCTGGAGG (
10
)
3.5
0.0035
P2.5 retina
GTCATAGCTG (
590
)
1.8
0.0018
P4.5 retina
AATCCTTGCC
(
2
)
77.3
0.0773
P4.5 retina
GTGCTGCAGG
(
4
)
4
0.004
P4.5 retina
GTCATAGCTG (
590
)
2
0.002
P6.5 retina
AATCCTTGCC
(
2
)
80
0.08
P6.5 retina
GTGCTGGAGG (
10
)
13.3
0.0133
P6.5 retina
GTCATAGCTG (
590
)
3.3
0.0033
P6.5 retina
GTGCTGCAGG
(
4
)
1.7
0.0017
P10.5 crx- retina
AATCCTTGCC
(
2
)
98.5
0.0985
P10.5 crx- retina
GTGCTGCAGG
(
4
)
3.7
0.0037
P10.5 crx- retina
ACTACAACAC
1.9
0.0019
P10.5 crx+ retina
AATCCTTGCC
(
2
)
80.7
0.0807
P10.5 crx+ retina
GTGCTGGAGG (
10
)
5.8
0.0058
P10.5 crx+ retina
CGTGTTCAAC (
3
)
1.9
0.0019
P10.5 crx+ retina
GCGGTCTCTC
(
2
)
1.9
0.0019
P10.5 crx+ retina
GTGCTGCAGG
(
4
)
1.9
0.0019
Adult retinal
AATCCTTGCC
(
2
)
29.6
0.0296
Adult retinal
GTGCTGGAGG (
10
)
3.7
0.0037
Adult retinal
GTCATAGCTG (
590
)
1.9
0.0019
ONL
AATCCTTGCC
(
2
)
36.4
0.0364
ONL
GTCATAGCTG (
590
)
5.7
0.0057
