Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.28379	Nup50	nucleoporin 50	15	15 49.3 cM	18141
Gene Ontology	integral to membrane | neurogenesis | nuclear pore | nucleocytoplasmic transport | nucleocytoplasmic transporter activity | outer membrane | porin activity | viral nucleocapsid
Human Homolog	NUP50[nucleoporin 50kDa]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 62 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AAATGTGAAT (4) 8.2 0.0082 P8 Cb GC GACGGGGGCT 3.3 0.0033 P8 Cb GC TTGCCACGTT (2) 3.3 0.0033 P8 Cb GC GCAACAAGGC (3) 1.6 0.0016 P8 Cb GC TGGCTAGAAA (3) 1.6 0.0016 Cb medulloblastoma AAATGTGAAT (4) 2.3 0.0023 Cb medulloblastoma AGAAGCAAGA (6) 2.3 0.0023 Cb medulloblastoma CCTTGAATAT (2) 2.3 0.0023 P8 GC+1d culture AAATGTGAAT (4) 5.7 0.0057 P8 GC+1d culture AGAAGCAAGA (6) 1.1 0.0011 P8 GC+1d culture GACGGGGGCT 1.1 0.0011 P8 GC+1d culture TGGCTAGAAA (3) 1.1 0.0011 P8 GC+1d culture TTGCCACGTT (2) 1.1 0.0011 P8 GC+SHH+1d culture AAATGTGAAT (4) 9.4 0.0094 P8 GC+SHH+1d culture CCTTGAATAT (2) 2.3 0.0023 P8 GC+SHH+1d culture AAATGAAAAT (10) 1.2 0.0012 P8 GC+SHH+1d culture AACAACACAG (6) 1.2 0.0012 P8 GC+SHH+1d culture GACGGGGGCT 1.2 0.0012 P8 GC+SHH+1d culture TGGCTAGAAA (3) 1.2 0.0012 P8 GC+SHH+1d culture TTGCCACGTT (2) 1.2 0.0012 3T3 fibroblasts TTGCCACGTT (2) 7 0.007 3T3 fibroblasts GGGCTGGAGA (8) 3.5 0.0035 E15 cortex AGAAGCAAGA (6) 4.9 0.0049 P1 cortex AAATGAAAAT (10) 4.5 0.0045 P1 cortex AAATGTGAAT (4) 4.5 0.0045 P1 cortex AGAAGCAAGA (6) 4.5 0.0045 Hypothalamus TGGCTAGAAA (3) 3.6 0.0036 Hypothalamus AAATGTGAAT (4) 1.8 0.0018 E12.5 retina AAATGTGAAT (4) 9.4 0.0094 E12.5 retina AGAAGCAAGA (6) 1.9 0.0019 E12.5 retina GACGGGGGCT 1.9 0.0019 E12.5 retina TGGCTAGAAA (3) 1.9 0.0019 E14.5 retina AAATGTGAAT (4) 9.1 0.0091 E14.5 retina GGGCTGGAGA (8) 1.8 0.0018 E14.5 retina TGGCTAGAAA (3) 1.8 0.0018 E14.5 retina TTGCCACGTT (2) 1.8 0.0018 E16.5 retina TTGCCACGTT (2) 3.6 0.0036 E16.5 retina AAATGTGAAT (4) 1.8 0.0018 E18.5 retina AAATGTGAAT (4) 5.5 0.0055 E18.5 retina GACGGGGGCT 1.8 0.0018 P0.5 retina AAATGTGAAT (4) 3.9 0.0039 P0.5 retina AACAACACAG (6) 3.9 0.0039 P0.5 retina AAATGAAAAT (10) 2 0.002 P0.5 retina GGGCTGGAGA (8) 2 0.002 P0.5 retina TGGCTAGAAA (3) 2 0.002 P2.5 retina AAATGTGAAT (4) 8.8 0.0088 P2.5 retina AAATGAAAAT (10) 1.8 0.0018 P4.5 retina AAATGTGAAT (4) 7.9 0.0079 P4.5 retina GGGCTGGAGA (8) 2 0.002 P6.5 retina AAATGTGAAT (4) 5 0.005 P6.5 retina AAATGAAAAT (10) 1.7 0.0017 P6.5 retina GCAACAAGGC (3) 1.7 0.0017 P10.5 crx- retina AAATGTGAAT (4) 3.7 0.0037 P10.5 crx- retina TTGCCACGTT (2) 1.9 0.0019 P10.5 crx+ retina AAATGTGAAT (4) 1.9 0.0019 P10.5 crx+ retina TGGCTAGAAA (3) 1.9 0.0019 Adult retinal AAATGTGAAT (4) 5.6 0.0056 Adult retinal GGGCTGGAGA (8) 5.6 0.0056 ONL AAATGTGAAT (4) 3.8 0.0038 ONL AAATGAAAAT (10) 1.9 0.0019 ONL GGGCTGGAGA (8) 1.9 0.0019 ONL TTGCCACGTT (2) 1.9 0.0019