Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.28382	Katnb1	katanin p80 (WD40-containing) subunit B 1	8		74187
Gene Ontology	biological_process unknown | katanin | molecular_function unknown
Human Homolog	KATNB1[katanin p80 (WD repeat containing) subunit B 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 52 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GTTGCCAGCC (4) 6.5 0.0065 P8 Cb GC GGCCAGTTGG (6) 4.9 0.0049 P8 Cb GC GCCAGCCTTG (2) 1.6 0.0016 P8 Cb GC TTCCTCTCCC (3) 1.6 0.0016 Cb medulloblastoma GGCCAGTTGG (6) 18.5 0.0185 Cb medulloblastoma GTTGCCAGCC (4) 6.9 0.0069 Cb medulloblastoma TTCCTCTCCC (3) 2.3 0.0023 P8 GC+1d culture GTTGCCAGCC (4) 4.6 0.0046 P8 GC+1d culture GGCCAGTTGG (6) 3.4 0.0034 P8 GC+1d culture TATATAATGT (4) 3.4 0.0034 P8 GC+1d culture GCCAGCCTTG (2) 1.1 0.0011 P8 GC+1d culture TTCCTCTCCC (3) 1.1 0.0011 P8 GC+SHH+1d culture GGCCAGTTGG (6) 5.9 0.0059 P8 GC+SHH+1d culture GTTGCCAGCC (4) 1.2 0.0012 3T3 fibroblasts GGCCAGTTGG (6) 21 0.021 3T3 fibroblasts GTGGGTGGGT (5) 3.5 0.0035 E15 cortex GGCCAGTTGG (6) 14.8 0.0148 P1 cortex CAACAAAGCC (2) 4.5 0.0045 P1 cortex GGCCAGTTGG (6) 4.5 0.0045 Hypothalamus GGCCAGTTGG (6) 5.4 0.0054 Hypothalamus TTCCTCTCCC (3) 3.6 0.0036 E12.5 retina GCAGTGCCTT (7) 1.9 0.0019 E12.5 retina GGCCAGTTGG (6) 1.9 0.0019 E12.5 retina TTCCTCTCCC (3) 1.9 0.0019 E14.5 retina GTTGCCAGCC (4) 3.6 0.0036 E14.5 retina TTCCTCTCCC (3) 1.8 0.0018 E16.5 retina GGCCAGTTGG (6) 3.6 0.0036 E16.5 retina GCCAGCCTTG (2) 1.8 0.0018 E18.5 retina GTTGCCAGCC (4) 5.5 0.0055 E18.5 retina GGCCAGTTGG (6) 3.6 0.0036 E18.5 retina TTCCTCTCCC (3) 1.8 0.0018 P0.5 retina GGCCAGTTGG (6) 9.8 0.0098 P0.5 retina GTGGGTGGGT (5) 2 0.002 P2.5 retina CAACAAAGCC (2) 1.8 0.0018 P2.5 retina TTCCTCTCCC (3) 1.8 0.0018 P4.5 retina GGCCAGTTGG (6) 4 0.004 P4.5 retina GCAGTGCCTT (7) 2 0.002 P4.5 retina GTTGCCAGCC (4) 2 0.002 P6.5 retina GGCCAGTTGG (6) 5 0.005 P6.5 retina GTTGCCAGCC (4) 5 0.005 P10.5 crx- retina GGCCAGTTGG (6) 14.9 0.0149 P10.5 crx- retina GTTGCCAGCC (4) 5.6 0.0056 P10.5 crx- retina CAACAAAGCC (2) 1.9 0.0019 P10.5 crx+ retina GGCCAGTTGG (6) 17.3 0.0173 P10.5 crx+ retina GCAGTGCCTT (7) 1.9 0.0019 P10.5 crx+ retina GTGGGTGGGT (5) 1.9 0.0019 P10.5 crx+ retina GTTGCCAGCC (4) 1.9 0.0019 Adult retinal TTCCTCTCCC (3) 7.4 0.0074 Adult retinal GGCCAGTTGG (6) 5.6 0.0056 Adult retinal GTTGCCAGCC (4) 1.9 0.0019 ONL GTTGCCAGCC (4) 5.7 0.0057 ONL TTCCTCTCCC (3) 3.8 0.0038