Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.28449
B230219D22Rik
RIKEN cDNA B230219D22 gene
13
78521
Human Homolog
FLJ37562[hypothetical protein FLJ37562]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 66 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
TGGTTGCTGG (
369
)
68.5
0.0685
P8 Cb GC
ATTTGTATCT
(
7
)
6.5
0.0065
P8 Cb GC
ATTTGTTTTT
(
2
)
3.3
0.0033
Cb medulloblastoma
TGGTTGCTGG (
369
)
113.3
0.1133
Cb medulloblastoma
GACATTAAAA
6.9
0.0069
Cb medulloblastoma
ATTTGTATCT
(
7
)
2.3
0.0023
P8 GC+1d culture
TGGTTGCTGG (
369
)
57.1
0.0571
P8 GC+1d culture
ATTTGTATCT
(
7
)
12.6
0.0126
P8 GC+1d culture
GAAATTAAAA
(
5
)
2.3
0.0023
P8 GC+1d culture
ATTTGTTTTT
(
2
)
1.1
0.0011
P8 GC+SHH+1d culture
TGGTTGCTGG (
369
)
89
0.089
P8 GC+SHH+1d culture
ATTTGTATCT
(
7
)
8.2
0.0082
P8 GC+SHH+1d culture
TGAAACAGTT
(
2
)
3.5
0.0035
P8 GC+SHH+1d culture
CCTTATTTAT
(
2
)
1.2
0.0012
P8 GC+SHH+1d culture
GAAATTAAAA
(
5
)
1.2
0.0012
P8 GC+SHH+1d culture
GACATTAAAA
1.2
0.0012
3T3 fibroblasts
TGGTTGCTGG (
369
)
220.8
0.2208
E15 cortex
TGGTTGCTGG (
369
)
277.1
0.2771
E15 cortex
TGGGTTCAGT
(
2
)
4.9
0.0049
P1 cortex
TGGTTGCTGG (
369
)
86.4
0.0864
P1 cortex
ATTTGTATCT
(
7
)
9.1
0.0091
P1 cortex
TGAAACAGTT
(
2
)
4.5
0.0045
Hypothalamus
TGGTTGCTGG (
369
)
349.6
0.3496
Hypothalamus
ATTTGTATCT
(
7
)
1.8
0.0018
E12.5 retina
TGGTTGCTGG (
369
)
157.7
0.1577
E12.5 retina
ATTTGTATCT
(
7
)
3.8
0.0038
E12.5 retina
GAAATTAAAA
(
5
)
1.9
0.0019
E14.5 retina
TGGTTGCTGG (
369
)
936.5
0.9365
E14.5 retina
ATTTGTATCT
(
7
)
7.3
0.0073
E16.5 retina
TGGTTGCTGG (
369
)
767.9
0.7679
E16.5 retina
ATTTGTATCT
(
7
)
12.7
0.0127
E16.5 retina
GACATTAAAA
1.8
0.0018
E16.5 retina
TGAAACAGTT
(
2
)
1.8
0.0018
E18.5 retina
TGGTTGCTGG (
369
)
252.8
0.2528
E18.5 retina
ATTTGTATCT
(
7
)
12.7
0.0127
E18.5 retina
GACATTAAAA
1.8
0.0018
P0.5 retina
TGGTTGCTGG (
369
)
190.4
0.1904
P0.5 retina
ATTTGTATCT
(
7
)
9.8
0.0098
P0.5 retina
ATTTGTTTTT
(
2
)
2
0.002
P0.5 retina
TGAAACAGTT
(
2
)
2
0.002
P2.5 retina
TGGTTGCTGG (
369
)
165.4
0.1654
P2.5 retina
ATTTGTATCT
(
7
)
12.3
0.0123
P2.5 retina
ATTTGTTTTT
(
2
)
1.8
0.0018
P2.5 retina
GACATTAAAA
1.8
0.0018
P4.5 retina
TGGTTGCTGG (
369
)
150.6
0.1506
P4.5 retina
ATTTGTATCT
(
7
)
9.9
0.0099
P6.5 retina
TGGTTGCTGG (
369
)
156.7
0.1567
P6.5 retina
ATTTGTATCT
(
7
)
1.7
0.0017
P6.5 retina
GACATTAAAA
1.7
0.0017
P6.5 retina
TGGGTTCAGT
(
2
)
1.7
0.0017
P10.5 crx- retina
TGGTTGCTGG (
369
)
280.5
0.2805
P10.5 crx- retina
ATTTGTATCT
(
7
)
7.4
0.0074
P10.5 crx- retina
CCTTATTTAT
(
2
)
1.9
0.0019
P10.5 crx- retina
TGAAACAGTT
(
2
)
1.9
0.0019
P10.5 crx+ retina
TGGTTGCTGG (
369
)
101.9
0.1019
P10.5 crx+ retina
ATTTGTATCT
(
7
)
9.6
0.0096
P10.5 crx+ retina
TGAAACAGTT
(
2
)
1.9
0.0019
P10.5 crx+ retina
TGGGTTCAGT
(
2
)
1.9
0.0019
Adult retinal
TGGTTGCTGG (
369
)
214.8
0.2148
Adult retinal
ATTTGTATCT
(
7
)
7.4
0.0074
Adult retinal
CCTTATTTAT
(
2
)
1.9
0.0019
Adult retinal
GAAATTAAAA
(
5
)
1.9
0.0019
ONL
TGGTTGCTGG (
369
)
398.4
0.3984
ONL
ATTTGTATCT
(
7
)
1.9
0.0019
ONL
ATTTGTTTTT
(
2
)
1.9
0.0019
ONL
GACATTAAAA
1.9
0.0019
