Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.284503	Cds2	CDP-diacylglycerol synthase (phosphatidate cytidylyltransferase) 2	2	2 73.0 cM	110911
Gene Ontology	integral to membrane | membrane | mitochondrial inner membrane | nucleotidyltransferase activity | phosphatidate cytidylyltransferase activity | phospholipid biosynthesis | phospholipid metabolism | transferase activity
Human Homolog	CDS2[CDP-diacylglycerol synthase (phosphatidate cytidylyltransferase) 2]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 84 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CCTTTAATCC (355) 52.2 0.0522 P8 Cb GC TCAGAGCAGC (3) 3.3 0.0033 P8 Cb GC AAAGAACACA (2) 1.6 0.0016 P8 Cb GC CAGCCTCAGC (3) 1.6 0.0016 Cb medulloblastoma CCTTTAATCC (355) 41.6 0.0416 Cb medulloblastoma TCAGAGCAGC (3) 4.6 0.0046 Cb medulloblastoma TGAGAAAAAA (3) 4.6 0.0046 Cb medulloblastoma AAAGAACACA (2) 2.3 0.0023 Cb medulloblastoma CAGCCTCAGC (3) 2.3 0.0023 Cb medulloblastoma GGCACCCGGA (2) 2.3 0.0023 P8 GC+1d culture CCTTTAATCC (355) 32 0.032 P8 GC+1d culture CAGCCTCAGC (3) 9.1 0.0091 P8 GC+1d culture TCAGAGCAGC (3) 8 0.008 P8 GC+1d culture AAAGAACACA (2) 1.1 0.0011 P8 GC+1d culture GATTCCACAC (2) 1.1 0.0011 P8 GC+1d culture TGACCTTGCT (4) 1.1 0.0011 P8 GC+SHH+1d culture CCTTTAATCC (355) 25.8 0.0258 P8 GC+SHH+1d culture CAGCCTCAGC (3) 9.4 0.0094 P8 GC+SHH+1d culture TCAGAGCAGC (3) 8.2 0.0082 P8 GC+SHH+1d culture GGCACCCGGA (2) 1.2 0.0012 P8 GC+SHH+1d culture TGACCTTGCT (4) 1.2 0.0012 P8 GC+SHH+1d culture TGTGTCCAGA (4) 1.2 0.0012 3T3 fibroblasts CCTTTAATCC (355) 70.1 0.0701 3T3 fibroblasts TCAGAGCAGC (3) 10.5 0.0105 3T3 fibroblasts CAGCCTCAGC (3) 7 0.007 E15 cortex CCTTTAATCC (355) 54.4 0.0544 E15 cortex CAGCCTCAGC (3) 9.9 0.0099 E15 cortex TCAGAGCAGC (3) 4.9 0.0049 P1 cortex CCTTTAATCC (355) 154.5 0.1545 P1 cortex TCAGAGCAGC (3) 4.5 0.0045 Hypothalamus CCTTTAATCC (355) 19.9 0.0199 Hypothalamus CAGCCTCAGC (3) 9.1 0.0091 Hypothalamus TCAGAGCAGC (3) 3.6 0.0036 Hypothalamus AAAGAACACA (2) 1.8 0.0018 Hypothalamus TGACCTTGCT (4) 1.8 0.0018 Hypothalamus TGAGAAAAAA (3) 1.8 0.0018 E12.5 retina CCTTTAATCC (355) 75.1 0.0751 E12.5 retina CAGCCTCAGC (3) 1.9 0.0019 E14.5 retina CCTTTAATCC (355) 120.3 0.1203 E14.5 retina CAGCCTCAGC (3) 1.8 0.0018 E14.5 retina GTGGGCGTCT (2) 1.8 0.0018 E16.5 retina CCTTTAATCC (355) 68.8 0.0688 E16.5 retina CAGCCTCAGC (3) 3.6 0.0036 E16.5 retina TCAGAGCAGC (3) 1.8 0.0018 E18.5 retina CCTTTAATCC (355) 23.6 0.0236 E18.5 retina CAGCCTCAGC (3) 3.6 0.0036 E18.5 retina AAAGAACACA (2) 1.8 0.0018 P0.5 retina CCTTTAATCC (355) 72.6 0.0726 P0.5 retina TCAGAGCAGC (3) 2 0.002 P2.5 retina CCTTTAATCC (355) 70.4 0.0704 P2.5 retina AAAGAACACA (2) 1.8 0.0018 P2.5 retina CAGCCTCAGC (3) 1.8 0.0018 P2.5 retina TGACCTTGCT (4) 1.8 0.0018 P4.5 retina CCTTTAATCC (355) 43.6 0.0436 P4.5 retina CAGCCTCAGC (3) 5.9 0.0059 P4.5 retina AAAGAACACA (2) 2 0.002 P4.5 retina TCAGAGCAGC (3) 2 0.002 P4.5 retina TGAGAAAAAA (3) 2 0.002 P6.5 retina CCTTTAATCC (355) 70 0.07 P6.5 retina CAGCCTCAGC (3) 6.7 0.0067 P10.5 crx- retina CCTTTAATCC (355) 63.2 0.0632 P10.5 crx- retina CAGCCTCAGC (3) 16.7 0.0167 P10.5 crx- retina AAAGAACACA (2) 1.9 0.0019 P10.5 crx- retina TCAGAGCAGC (3) 1.9 0.0019 P10.5 crx- retina TGTGTCCAGA (4) 1.9 0.0019 P10.5 crx+ retina CCTTTAATCC (355) 38.4 0.0384 P10.5 crx+ retina CAGCCTCAGC (3) 11.5 0.0115 P10.5 crx+ retina TACAAACACA 9.6 0.0096 P10.5 crx+ retina TCAGAGCAGC (3) 3.8 0.0038 P10.5 crx+ retina TGTGTCCAGA (4) 1.9 0.0019 Adult retinal CCTTTAATCC (355) 129.6 0.1296 Adult retinal TACAAACACA 33.3 0.0333 Adult retinal CAGCCTCAGC (3) 16.7 0.0167 Adult retinal GATTCCACAC (2) 1.9 0.0019 Adult retinal GGCACCCGGA (2) 1.9 0.0019 Adult retinal TCAGAGCAGC (3) 1.9 0.0019 ONL CCTTTAATCC (355) 84.3 0.0843 ONL TACAAACACA 23 0.023 ONL GTGGGCGTCT (2) 9.6 0.0096 ONL CAGCCTCAGC (3) 5.7 0.0057 ONL AAAGAACACA (2) 1.9 0.0019 ONL GATTCCACAC (2) 1.9 0.0019 ONL TCAGAGCAGC (3) 1.9 0.0019 ONL TGAGAAAAAA (3) 1.9 0.0019