Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.284594	Tjp4	tight junction protein 4 (peripheral)	17		74094
Gene Ontology	biological_process unknown | protein binding | tight junction
Human Homolog	TJP4[tight junction protein 4 (peripheral)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 68 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AGTGGGGGTG (6) 29.4 0.0294 P8 Cb GC AGCAGTGGTG (7) 1.6 0.0016 P8 Cb GC GGGAGTGTTG (2) 1.6 0.0016 P8 Cb GC TGATGCAGGG (2) 1.6 0.0016 Cb medulloblastoma AGTGGGGGTG (6) 11.6 0.0116 Cb medulloblastoma GGGAGTGTTG (2) 9.2 0.0092 Cb medulloblastoma AGCAGTGGTG (7) 4.6 0.0046 P8 GC+1d culture AGTGGGGGTG (6) 62.8 0.0628 P8 GC+1d culture GGGAGTGTTG (2) 5.7 0.0057 P8 GC+1d culture CAGAGGCAGA (3) 1.1 0.0011 P8 GC+1d culture TTGATGGCAG 1.1 0.0011 P8 GC+SHH+1d culture AGTGGGGGTG (6) 31.6 0.0316 P8 GC+SHH+1d culture GGGAGTGTTG (2) 5.9 0.0059 P8 GC+SHH+1d culture AGCAGTGGTG (7) 1.2 0.0012 P8 GC+SHH+1d culture CAGAGGCAGA (3) 1.2 0.0012 3T3 fibroblasts TTGATGGCAG 7 0.007 3T3 fibroblasts AGCAGTGGTG (7) 3.5 0.0035 E15 cortex AGTGGGGGTG (6) 29.7 0.0297 E15 cortex GGGAGTGTTG (2) 19.8 0.0198 P1 cortex AGTGGGGGTG (6) 36.4 0.0364 P1 cortex GGGAGTGTTG (2) 13.6 0.0136 Hypothalamus AGTGGGGGTG (6) 30.8 0.0308 Hypothalamus GGGAGTGTTG (2) 5.4 0.0054 Hypothalamus AGCAGTGGTG (7) 1.8 0.0018 Hypothalamus TGATGCAGGG (2) 1.8 0.0018 E12.5 retina GGGAGTGTTG (2) 9.4 0.0094 E12.5 retina AGCAGTGGTG (7) 1.9 0.0019 E12.5 retina AGTGGGGGTG (6) 1.9 0.0019 E12.5 retina CAGAGGCAGA (3) 1.9 0.0019 E12.5 retina TTGATGGCAG 1.9 0.0019 E14.5 retina GGGAGTGTTG (2) 9.1 0.0091 E14.5 retina AGTGGGGGTG (6) 7.3 0.0073 E14.5 retina CAGAGGCAGA (3) 1.8 0.0018 E14.5 retina TTGATGGCAG 1.8 0.0018 E16.5 retina AGTGGGGGTG (6) 30.8 0.0308 E16.5 retina GGGAGTGTTG (2) 3.6 0.0036 E16.5 retina TTGATGGCAG 1.8 0.0018 E18.5 retina GGGAGTGTTG (2) 20 0.02 E18.5 retina CAGAGGCAGA (3) 3.6 0.0036 E18.5 retina AGTGGGGGTG (6) 1.8 0.0018 P0.5 retina AGTGGGGGTG (6) 19.6 0.0196 P0.5 retina GGGAGTGTTG (2) 11.8 0.0118 P0.5 retina TGATGCAGGG (2) 3.9 0.0039 P2.5 retina GGGAGTGTTG (2) 22.9 0.0229 P2.5 retina AGTGGGGGTG (6) 12.3 0.0123 P2.5 retina AGCAGTGGTG (7) 5.3 0.0053 P2.5 retina CAGAGGCAGA (3) 1.8 0.0018 P2.5 retina TGATGCAGGG (2) 1.8 0.0018 P4.5 retina GGGAGTGTTG (2) 25.8 0.0258 P4.5 retina AGTGGGGGTG (6) 7.9 0.0079 P4.5 retina TTGATGGCAG 2 0.002 P6.5 retina GGGAGTGTTG (2) 26.7 0.0267 P6.5 retina AGTGGGGGTG (6) 21.7 0.0217 P6.5 retina AGCAGTGGTG (7) 1.7 0.0017 P10.5 crx- retina AGTGGGGGTG (6) 44.6 0.0446 P10.5 crx- retina GGGAGTGTTG (2) 13 0.013 P10.5 crx- retina TTGATGGCAG 3.7 0.0037 P10.5 crx- retina AGCAGTGGTG (7) 1.9 0.0019 P10.5 crx+ retina GGGAGTGTTG (2) 21.1 0.0211 P10.5 crx+ retina AGTGGGGGTG (6) 19.2 0.0192 P10.5 crx+ retina AGCAGTGGTG (7) 5.8 0.0058 P10.5 crx+ retina CAGAGGCAGA (3) 1.9 0.0019 Adult retinal GGGAGTGTTG (2) 22.2 0.0222 Adult retinal AGTGGGGGTG (6) 16.7 0.0167 Adult retinal AGCAGTGGTG (7) 5.6 0.0056 Adult retinal TTGATGGCAG 3.7 0.0037 ONL AGCAGTGGTG (7) 5.7 0.0057 ONL AGTGGGGGTG (6) 1.9 0.0019